BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2251at6073Complete405.9249.0aint_s0110.g31.t1protein AMN1 homologJBrowse
2255at6073Complete1263.7581.0aint_s0130.g31.t1Kelch repeat type 1JBrowse
2262at6073Complete318.8146.0aint_s0049.g43.t1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Complete264.7178.0aint_s0077.g78.t1Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete938.0430.0aint_s0076.g19.t1adenosylhomocysteinase AJBrowse
2305at6073Complete494.1240.0aint_s0029.g89.t1vacuolar-sorting protein SNF8JBrowse
2333at6073Complete722.3424.0aint_s0003.g106.t1carbohydrate sulfotransferase 1JBrowse
2340at6073Duplicated718.6374.0aint_s0233.g16.t1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2340at6073Duplicated711.8374.0aint_s0233.g16.t2Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Fragmented98.752.0aint_s1351.g4.t1RING-box protein 1JBrowse
2385at6073Fragmented380.2213.0aint_s0009.g66.t2polyhomeotic-like protein 2JBrowse
2419at6073Complete207.4121.0aint_s0039.g62.t1nuclear transport factor 2JBrowse
2440at6073Duplicated382.4224.0aint_s0174.g30.t1uncharacterized protein LOC116287038JBrowse
2440at6073Duplicated372.1213.0aint_s0174.g30.t2uncharacterized protein LOC116287038JBrowse
2456at6073Complete285.4184.0aint_s0044.g46.t1transmembrane protein 267-likeJBrowse
2501at6073Complete263.2117.0aint_s0041.g20.t1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete591.1285.0aint_s0566.g13.t1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Complete1154.1602.0aint_s0420.g1.t1serine/threonine-protein kinase PLK1JBrowse
2570at6073Complete495.4267.0aint_s0017.g96.t1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Complete272.1231.0aint_s0083.g87.t1interferon regulatory factor 1JBrowse
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