BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1361at6073Duplicated469.3316.0g12136.t1.1potassium channel subfamily K member 9JBrowse
1370at6073Fragmented389.7220.0BRAKERHOCP00005010591.1homeobox protein six1-likeJBrowse
1408at6073Duplicated130.1169.0BRAKERHOCP00005020517.1dnaJ homolog subfamily C member 12-likeJBrowse
1408at6073Duplicated130.1169.0g8126.t1.1dnaJ homolog subfamily C member 12-likeJBrowse
1419at6073Duplicated576.2306.0BRAKERHOCP00005019837.1protein arginine N-methyltransferase 1JBrowse
1419at6073Duplicated576.2306.0g8804.t1.1protein arginine N-methyltransferase 1JBrowse
1422at6073Duplicated1088.0571.0BRAKERHOCP00005018865.1Integrator complex subunit 11JBrowse
1422at6073Duplicated1088.0571.0g9238.t1.1Integrator complex subunit 11JBrowse
1440at6073Duplicated267.4233.0BRAKERHOCP00005003639.1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1440at6073Duplicated267.4233.0g11436.t1.1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1457at6073Duplicated542.4386.0BRAKERHOCP00005003581.1ceramide glucosyltransferaseJBrowse
1457at6073Duplicated542.4386.0g11361.t1.1ceramide glucosyltransferaseJBrowse
1491at6073Duplicated489.6328.0BRAKERHOCP00005002665.1cell cycle control protein 50A-likeJBrowse
1491at6073Duplicated489.6328.0g7655.t1.1cell cycle control protein 50A-likeJBrowse
1580at6073Duplicated557.5341.0BRAKERHOCP00005011704.1dual specificity mitogen-activated protein kinase kinase 4JBrowse
1580at6073Duplicated557.5341.0g15954.t1.1dual specificity mitogen-activated protein kinase kinase 4JBrowse
1599at6073Duplicated551.9336.0BRAKERHOCP00005006321.1WD repeat domain phosphoinositide-interacting protein 4JBrowse
1599at6073Duplicated551.9336.0g13384.t1.1WD repeat domain phosphoinositide-interacting protein 4JBrowse
1619at6073Duplicated206.2113.0BRAKERHOCP00005013753.1transcription elongation factor SPT4JBrowse
1619at6073Duplicated206.2113.0g18508.t1.1transcription elongation factor SPT4JBrowse
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