BUSCO Gene Details in Montipora cactus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Montipora cactusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.1% [S: 70.8%, D: 3.3%] F: 15.7%, M: 10.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,375 (74.1%)2,268 (70.8%)107 (3.3%)504 (15.7%)324 (10.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Montipora cactus: 2,989 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2570at6073Complete491.9267BRAKERNUSP00000020688.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Complete253.7227BRAKERNUSP00000024364.1interferon regulatory factor 1JBrowse
2633at6073Complete1121.0597BRAKERNUSP00000045161.1Cleavage stimulation factor subunit 3JBrowse
2653at6073Complete656.2367BRAKERNUSP00000054989.1E3 ubiquitin-protein ligase FANCLJBrowse
2655at6073Complete309.9160BRAKERNUSP00000028363.1protein CFAP276JBrowse
2680at6073Complete445.0192BRAKERNUSP00000030243.1Cilia- and flagella-associated protein 20JBrowse
2694at6073Complete273.5128BRAKERNUSP00000037787.1Large ribosomal subunit protein eL40 domainJBrowse
2715at6073Complete375.2165BRAKERNUSP00000054884.1ras-related protein Rab-2JBrowse
2721at6073Fragmented1446.3755BRAKERNUSP00000038508.1glycine dehydrogenase (decarboxylating), mitochondrialJBrowse
2729at6073Complete1128.1565BRAKERNUSP00000031514.1kelch-like protein 5JBrowse
2733at6073Complete618.3346BRAKERNUSP00000028397.1queuosine salvage proteinJBrowse
2778at6073Complete570.1279BRAKERNUSP00000022305.1cyclin-C-likeJBrowse
2807at6073Complete496.4238BRAKERNUSP00000021112.1Protein yif1bJBrowse
2813at6073Complete267.8163BRAKERNUSP00000032717.1NADH dehydrogenaseJBrowse
2841at6073Complete657.9449BRAKERNUSP00000052230.1F-box/LRR-repeat protein 2-likeJBrowse
2853at6073Complete748.5395BRAKERNUSP00000021107.1WD repeat-containing protein 20JBrowse
2867at6073Fragmented1797.01043BRAKERNUSP00000048343.1uncharacterized protein LOC113684304 isoform X1JBrowse
2913at6073Complete471.5262BRAKERNUSP00000044357.1homeobox protein SIX1JBrowse
2934at6073Complete1424.9613BRAKERNUSP00000053213.1V-type proton ATPase catalytic subunit AJBrowse
2987at6073Complete1475.3837BRAKERNUSP00000041974.1Vacuolar protein sorting-associated protein 18JBrowse
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