BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2197at6073Fragmented153.6126.0CAB4012999.1protein FAM228BJBrowse
2201at6073Complete822.2443.0CAB3977143.1vesicular glutamate transporter 2JBrowse
2225at6073Complete324.0183.0CAB4021539.1protein Hikeshi-likeJBrowse
2251at6073Complete366.3249.0CAB4000465.1protein AMN1 homologJBrowse
2255at6073Complete1237.1581.0CAB3980831.1Kelch repeat type 1JBrowse
2262at6073Complete308.8145.0CAB3986574.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Complete206.4178.0CAB4000847.1Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete917.1430.0CAB3983627.1adenosylhomocysteinase AJBrowse
2305at6073Fragmented237.4134.0CAB4034741.1vacuolar-sorting protein SNF8JBrowse
2340at6073Fragmented242.0285.0CAB3985016.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Fragmented122.059.0CAB4032124.1RING-box protein 1JBrowse
2385at6073Complete325.0264.0CAB4002622.1polyhomeotic-like protein 2JBrowse
2419at6073Complete204.8124.0CAB4038134.1nuclear transport factor 2JBrowse
2440at6073Complete347.2233.0CAB4013043.1uncharacterized protein LOC116287038JBrowse
2456at6073Fragmented185.5119.0CAB3988487.1transmembrane protein 267-likeJBrowse
2501at6073Complete252.4117.0CAB4025556.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete528.7284.0CAB4002856.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Fragmented828.6455.0CAB4021839.1serine/threonine-protein kinase PLK1JBrowse
2570at6073Complete475.1267.0CAB4005495.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Complete248.9210.0CAB3979490.1interferon regulatory factor 1JBrowse
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