BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1419at6073Duplicated640.8320.0ENSORFP00005016701.1protein arginine N-methyltransferase 1JBrowse
1422at6073Fragmented918.6378.0ENSORFP00005006177.1Integrator complex subunit 11JBrowse
1440at6073Duplicated411.4233.0ENSORFP00005005963.1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1440at6073Duplicated411.4233.0ENSORFP00005042639.1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1440at6073Duplicated388.9232.0ENSORFP00005005962.1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1440at6073Duplicated388.9232.0ENSORFP00005042634.1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1457at6073Fragmented444.6246.0ENSORFP00005001079.1ceramide glucosyltransferaseJBrowse
1484at6073Complete455.1218.0ENSORFP00005028167.1cleavage and polyadenylation specificity factor subunit 5JBrowse
1580at6073Complete610.5326.0ENSORFP00005038010.1dual specificity mitogen-activated protein kinase kinase 4JBrowse
1622at6073Duplicated796.2418.0ENSORFP00005030142.1mannose-1-phosphate guanyltransferase alphaJBrowse
1622at6073Duplicated791.2416.0ENSORFP00005030125.1mannose-1-phosphate guanyltransferase alphaJBrowse
1627at6073Complete450.7271.0ENSORFP00005030489.1tubulin polyglutamylase complex subunit 2JBrowse
1630at6073Complete629.5394.0ENSORFP00005015760.1DNA excision repair protein ERCC-8JBrowse
1660at6073Duplicated267.6199.0ENSORFP00005050484.1ubiquitin-like-conjugating enzyme ATG10JBrowse
1660at6073Duplicated266.0199.0ENSORFP00005013155.1ubiquitin-like-conjugating enzyme ATG10JBrowse
1705at6073Complete200.1137.0ENSORFP00005005529.1Selenoprotein F/MJBrowse
1748at6073Duplicated546.1258.0ENSORFP00005014724.1Succinate dehydrogenase JBrowse
1748at6073Duplicated542.9249.0ENSORFP00005014720.1Succinate dehydrogenase JBrowse
1757at6073Duplicated983.8533.0ENSORFP00005000521.1frizzled-1-likeJBrowse
1757at6073Duplicated983.2529.0ENSORFP00005000532.1frizzled-1-likeJBrowse
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