BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
29590at6073Complete395.8212.0alor_g11433.t1Golgi SNAP receptor complex member 2JBrowse
29631at6073Complete403.8385.0alor_g19721.t1keratin-associated protein 16-1JBrowse
29640at6073Complete688.6415.0alor_g26968.t1FERM domain-containing protein 8JBrowse
29671at6073Complete557.5255.0alor_g2436.t1small ribosomal subunit protein uS5JBrowse
29699at6073Complete343.5197.0alor_g22379.t1TEX261JBrowse
29723at6073Complete635.4315.0alor_g17041.t160S acidic ribosomal protein P0-likeJBrowse
29735at6073Complete532.9294.0alor_g3193.t1zinc transporter 7-B-likeJBrowse
29833at6073Complete372.2328.0alor_g485.t1Integrator complex subunit 12JBrowse
29853at6073Complete1591.91025.0alor_g17521.t1constitutive coactivator of PPAR-gamma-like protein 1JBrowse
29868at6073Complete386.8259.0alor_g3681.t1homeobox protein DLX-6JBrowse
29879at6073Complete616.3323.0alor_g26669.t1calcium-binding protein 39JBrowse
29900at6073Complete1034.7579.0alor_g10974.t1tRNA (uracil-5-)-methyltransferase homolog AJBrowse
29908at6073Complete757.8391.0alor_g25490.t1serine/threonine-protein kinase 25JBrowse
29935at6073Fragmented675.8447.0alor_g10968.t1double C2-like domain-containing protein betaJBrowse
30011at6073Complete607.9300.0alor_g5871.t1growth hormone-inducible transmembrane proteinJBrowse
30015at6073Complete576.3366.0alor_g12416.t1chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
30041at6073Duplicated628.5379.0alor_g10934.t1RNA-binding protein Musashi homolog 2JBrowse
30041at6073Duplicated579.2362.0alor_g10934.t2RNA-binding protein Musashi homolog 2JBrowse
30047at6073Complete819.7492.0alor_g7238.t1YTH domain-containing family protein 1JBrowse
30082at6073Complete274.9196.0alor_g10006.t1RNA binding protein fox-1 homolog 3-likeJBrowse
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