BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
30090at6073Complete1856.41266.0alor_g3760.t1Host cell factorJBrowse
30152at6073Complete1219.1633.0alor_g22638.t1kinesin-like protein KIF25JBrowse
30192at6073Complete870.0508.0alor_g25835.t1DNA-directed RNA polymerase III subunit RPC3JBrowse
30216at6073Duplicated556.3294.0alor_g19513.t2Syntaxin-16JBrowse
30216at6073Duplicated543.3293.0alor_g19513.t1Syntaxin-16JBrowse
30235at6073Complete253.0151.0alor_g6444.t1low molecular weight phosphotyrosine protein phosphataseJBrowse
30249at6073Complete783.8421.0alor_g23105.t1presenilin-1JBrowse
30251at6073Complete1133.5637.0alor_g110.t1high affinity cAMP-specific and IBMX-insensitive 3, 5 -cyclic phosphodiesterase 8A-likeJBrowse
30285at6073Complete445.7284.0alor_g6878.t1disks large homolog 2-likeJBrowse
30286at6073Complete434.1257.0alor_g10355.t1putative hydroxypyruvate isomeraseJBrowse
30382at6073Fragmented551.8387.0alor_g11232.t1selenoprotein N-likeJBrowse
30383at6073Complete697.8443.0alor_g11280.t1forkhead box protein N3-likeJBrowse
30403at6073Complete578.3332.0alor_g12745.t1SUMO-activating enzyme subunit 1JBrowse
30405at6073Complete343.0214.0alor_g4288.t1thioredoxin-related transmembrane protein 1JBrowse
30409at6073Complete707.8455.0alor_g1886.t1testis-specific chromodomain protein Y 1-likeJBrowse
30440at6073Fragmented353.1293.0alor_g195.t2protrudin-likeJBrowse
30445at6073Complete1408.2841.0alor_g1258.t1EF-hand calcium-binding domain-containing protein 6JBrowse
30466at6073Complete623.2323.0alor_g24375.t1Sin3 histone deacetylase corepressor complex component SDS3JBrowse
30504at6073Complete214.3164.0alor_g19431.t1pre-rRNA-processing protein TSR2 homologJBrowse
30540at6073Duplicated362.8235.0alor_g25821.t2E3 ubiquitin-protein ligase RNF115-likeJBrowse
Go to page: of 167 pages
TOP