BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
36771at6073Duplicated271.9259.0HOLI03077.G7449cilia- and flagella-associated protein 410JBrowse
36773at6073Complete349.7174.0HOLI00383.G7401Mitochondrial import inner membrane translocase subunit Tim17-BJBrowse
36789at6073Duplicated133.2190.0HOLI04526.G39359uncharacterized protein LOC116308045JBrowse
36789at6073Duplicated132.3190.0HOLI04812.G34778uncharacterized protein LOC116308045JBrowse
36811at6073Fragmented180.3124.0HOLI01208.G25218protein FAM177A1-likeJBrowse
36825at6073Complete281.8664.0HOLI01323.G26918coilinJBrowse
36840at6073Fragmented341.8489.0HOLI01310.G23468E3 ubiquitin-protein ligase APD1-4, middle domainJBrowse
36852at6073Complete247.5133.0HOLI00027.G33038peptide methionine sulfoxide reductase MsrB-likeJBrowse
36866at6073Fragmented212.1145.0HOLI03617.G41539TLC domain-containing protein 5JBrowse
36906at6073Fragmented120.088.0HOLI00505.G3368339S ribosomal protein L55, mitochondrialJBrowse
36910at6073Complete737.2691.0HOLI00791.G38098E3 ubiquitin-protein ligase SH3RF1JBrowse
36918at6073Complete488.7317.0HOLI04695.G34785E3 ubiquitin-protein ligase KCMF1-likeJBrowse
36957at6073Complete908.9662.0HOLI01734.G31587SLIT-ROBO Rho GTPase-activating protein 1JBrowse
36984at6073Complete160.4261.0HOLI00418.G33318uncharacterized protein LOC113682664 isoform X1JBrowse
37022at6073Complete854.5652.0HOLI02582.G33099CCR4-NOT transcription complex, subunit 3JBrowse
37030at6073Complete451.9319.0HOLI02871.G7196Solute carrier family 35 member F1JBrowse
37194at6073Complete721.4436.0HOLI00019.G41991Serine/threonine-protein kinase Chk1JBrowse
37231at6073Duplicated310.0397.0HOLI02788.G4579protein transport protein sec31-likeJBrowse
37231at6073Duplicated307.7397.0HOLI04195.G13715protein transport protein sec31-likeJBrowse
37246at6073Complete860.3784.0HOLI00397.G59566golgin subfamily A member 1JBrowse
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