BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2633at6073Fragmented908.6470.0amic_s0102.g79.t1Cleavage stimulation factor subunit 3JBrowse
2653at6073Complete658.2368.0amic_s0070.g104.t1E3 ubiquitin-protein ligase FANCLJBrowse
2655at6073Complete306.5160.0amic_s0564.g2.t1protein CFAP276JBrowse
2680at6073Complete444.1192.0amic_s0055.g12.t1Cilia- and flagella-associated protein 20JBrowse
2694at6073Complete273.1128.0amic_s0023.g255.t1Large ribosomal subunit protein eL40 domainJBrowse
2715at6073Complete375.5165.0amic_s0002.g120.t1ras-related protein Rab-2JBrowse
2721at6073Complete1912.8951.0amic_s0010.g24.t1glycine dehydrogenase (decarboxylating), mitochondrialJBrowse
2729at6073Duplicated1131.4565.0amic_s0098.g18.t1kelch-like protein 5JBrowse
2729at6073Duplicated1119.5565.0amic_s0098.g18.t2kelch-like protein 5JBrowse
2778at6073Complete570.9279.0amic_s0014.g73.t1cyclin-C-likeJBrowse
2807at6073Duplicated532.3268.0amic_s0059.g53.t1Protein yif1bJBrowse
2807at6073Duplicated532.1268.0amic_s0059.g53.t2Protein yif1bJBrowse
2813at6073Fragmented231.1122.0amic_s0047.g8.t1NADH dehydrogenase JBrowse
2837at6073Complete538.8294.0amic_s0002.g350.t1epimerase family protein SDR39U1-likeJBrowse
2841at6073Complete689.4449.0amic_s0059.g38.t1F-box/LRR-repeat protein 2-likeJBrowse
2853at6073Fragmented617.9336.0amic_s0059.g56.t1WD repeat-containing protein 20JBrowse
2867at6073Complete2296.91341.0amic_s0272.g10.t1uncharacterized protein LOC113684304 isoform X1JBrowse
2886at6073Complete183.5132.0amic_s0102.g82.t1protein LTO1 homologJBrowse
2913at6073Complete476.4263.0amic_s0242.g15.t1homeobox protein SIX1JBrowse
2934at6073Complete1387.0613.0amic_s0129.g43.t1V-type proton ATPase catalytic subunit AJBrowse
Go to page: of 171 pages
TOP