BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1672at6073Complete1764.4850.0XP_074617231.1DNA topoisomerase 3-beta-1JBrowse
1705at6073Complete218.9136.0XP_074622439.1Selenoprotein F/MJBrowse
1748at6073Complete556.3257.0XP_074625370.1Succinate dehydrogenase JBrowse
1757at6073Complete1018.8532.0XP_074629160.1frizzled-1-likeJBrowse
1790at6073Complete296.9222.0XP_074633262.1short stature homeobox proteinJBrowse
1838at6073Complete371.5194.0XP_074633344.1SPRY domain-containing protein 7JBrowse
1859at6073Complete279.7166.0XP_074638162.1uncharacterized protein C16orf52 homologJBrowse
1880at6073Complete870.0457.0XP_074619406.1GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferaseJBrowse
1920at6073Duplicated551.6293.0XP_074633249.1kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated540.9293.0XP_074633248.1kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated505.6293.0XP_074633252.1kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated494.8293.0XP_074633251.1kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated511.2280.0XP_074633255.1kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated510.1278.0XP_074633250.1kidney mitochondrial carrier protein 1JBrowse
1944at6073Complete729.5355.0XP_074609641.1mitogen-activated protein kinase 14JBrowse
1962at6073Complete150.191.0XP_074626905.1SH3 domain-binding glutamic acid-rich 3JBrowse
2020at6073Complete376.4207.0XP_074617967.1DNA replication complex GINS protein PSF3-likeJBrowse
2036at6073Complete201.991.0XP_074614102.1small nuclear ribonucleoprotein EJBrowse
2051at6073Complete974.0560.0XP_074632275.1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Complete378.2196.0XP_074620299.1mitochondrial inner membrane protease ATP23JBrowse
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