BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2262at6073Duplicated317.6144.0ENSOFVP00000029466.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2262at6073Duplicated275.4140.0ENSOFVP00000029459.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Fragmented225.5130.0ENSOFVP00000005604.1Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete938.5430.0ENSOFVP00000000418.1adenosylhomocysteinase AJBrowse
2305at6073Complete499.1241.0ENSOFVP00000023053.1vacuolar-sorting protein SNF8JBrowse
2333at6073Complete726.3412.0ENSOFVP00000025625.1carbohydrate sulfotransferase 1JBrowse
2340at6073Complete532.9321.0ENSOFVP00000035398.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Duplicated235.4105.0ENSOFVP00000037761.1RING-box protein 1JBrowse
2378at6073Duplicated214.893.0ENSOFVP00000037766.1RING-box protein 1JBrowse
2385at6073Complete486.4282.0ENSOFVP00000027348.1polyhomeotic-like protein 2JBrowse
2419at6073Complete206.6123.0ENSOFVP00000025971.1nuclear transport factor 2JBrowse
2440at6073Complete377.9227.0ENSOFVP00000010098.1uncharacterized protein LOC116287038JBrowse
2501at6073Duplicated263.0117.0ENSOFVP00000001065.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2501at6073Duplicated261.9117.0ENSOFVP00000001056.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete586.2285.0ENSOFVP00000012724.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Complete1153.1601.0ENSOFVP00000003623.1serine/threonine-protein kinase PLK1JBrowse
2570at6073Duplicated486.0266.0ENSOFVP00000021710.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2570at6073Duplicated416.9230.0ENSOFVP00000021720.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Duplicated287.8239.0ENSOFVP00000033989.1interferon regulatory factor 1JBrowse
2617at6073Duplicated258.5239.0ENSOFVP00000033979.1interferon regulatory factor 1JBrowse
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