BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2837at6073Duplicated477.7294.0HOLI00018.G7688epimerase family protein SDR39U1-likeJBrowse
2837at6073Duplicated475.3294.0HOLI00078.G17285epimerase family protein SDR39U1-likeJBrowse
2853at6073Complete808.2480.0HOLI03095.G54095WD repeat-containing protein 20JBrowse
2886at6073Complete149.9123.0HOLI00573.G11318protein LTO1 homologJBrowse
2913at6073Fragmented393.2212.0HOLI01624.G39537homeobox protein SIX1JBrowse
2934at6073Complete1312.7612.0HOLI04333.G34333V-type proton ATPase catalytic subunit AJBrowse
2987at6073Complete1492.1933.0HOLI00361.G112Vacuolar protein sorting-associated protein 18JBrowse
2993at6073Complete507.4476.0HOLI00196.G8843protein REDUCED WALL ACETYLATION 1JBrowse
3019at6073Complete314.3209.0HOLI01624.G39532cilia- and flagella-associated protein 107-likeJBrowse
3025at6073Complete416.1219.0HOLI00636.G7253proteasome subunit beta type-1-AJBrowse
3028at6073Complete148.3105.0HOLI00806.G6645replication protein A 14 kDa subunit-likeJBrowse
3034at6073Complete622.2345.0HOLI01200.G12775galactose-1-phosphate uridylyltransferase-likeJBrowse
3050at6073Complete361.0291.0HOLI00898.G54436Peroxisomal biogenesis factor 3JBrowse
3060at6073Complete515.7394.0HOLI04104.G45124pyruvate dehydrogenase JBrowse
3078at6073Complete1007.7689.0HOLI00107.G11733exostosin-1-likeJBrowse
3099at6073Complete716.4513.0HOLI02688.G38956prolyl 4-hydroxylase subunit alpha-1JBrowse
3112at6073Complete693.0480.0HOLI01256.G36584fukutin-related protein-likeJBrowse
3114at6073Complete455.6284.0HOLI00797.G57569General transcription factor IIH subunit 3JBrowse
3139at6073Complete544.0372.0HOLI00156.G47450THUMP domain-containing 3JBrowse
3142at6073Fragmented171.8148.0HOLI00668.G47953homeobox protein MOX-1JBrowse
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