BUSCO Gene Details in Rhopilema esculentum

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Rhopilema esculentumBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 69.8%, D: 19.7%] F: 3.1%, M: 7.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,865 (89.5%)2,234 (69.8%)631 (19.7%)99 (3.1%)239 (7.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Rhopilema esculentum: 4,035 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2385at6073Complete214.0261.0XP_065060877.1polyhomeotic-like protein 2JBrowse
2419at6073Complete170.1121.0XP_065064134.1nuclear transport factor 2JBrowse
2440at6073Complete285.5233.0XP_065069536.1uncharacterized protein LOC116287038JBrowse
2456at6073Duplicated175.8182.0XP_065063937.1transmembrane protein 267-likeJBrowse
2456at6073Duplicated175.8182.0XP_065063938.1transmembrane protein 267-likeJBrowse
2501at6073Complete254.8117.0XP_065064356.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete465.7281.0XP_065054946.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Duplicated979.1594.0XP_065050972.1serine/threonine-protein kinase PLK1JBrowse
2568at6073Duplicated979.1594.0XP_065050973.1serine/threonine-protein kinase PLK1JBrowse
2617at6073Complete172.0228.0XP_065062967.1interferon regulatory factor 1JBrowse
2633at6073Complete1091.7680.0XP_065051591.1Cleavage stimulation factor subunit 3JBrowse
2653at6073Duplicated420.9359.0XP_065058605.1E3 ubiquitin-protein ligase FANCLJBrowse
2653at6073Duplicated420.9359.0XP_065058613.1E3 ubiquitin-protein ligase FANCLJBrowse
2653at6073Duplicated420.9359.0XP_065058621.1E3 ubiquitin-protein ligase FANCLJBrowse
2653at6073Duplicated420.9359.0XP_065058629.1E3 ubiquitin-protein ligase FANCLJBrowse
2655at6073Complete249.8160.0XP_065067326.1protein CFAP276JBrowse
2680at6073Complete438.0191.0XP_065064543.1Cilia- and flagella-associated protein 20JBrowse
2694at6073Complete269.3128.0XP_065056649.1Large ribosomal subunit protein eL40 domainJBrowse
2715at6073Complete367.3165.0XP_065064286.1ras-related protein Rab-2JBrowse
2721at6073Complete1765.4943.0XP_065069205.1glycine dehydrogenase (decarboxylating), mitochondrialJBrowse
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