BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1790at6073Duplicated269.8221.0ENSORFP00005013111.1short stature homeobox proteinJBrowse
1790at6073Duplicated260.0221.0ENSORFP00005013101.1short stature homeobox proteinJBrowse
1790at6073Duplicated238.0203.0ENSORFP00005035517.1short stature homeobox proteinJBrowse
1838at6073Complete366.5194.0ENSORFP00005021252.1SPRY domain-containing protein 7JBrowse
1859at6073Complete270.5166.0ENSORFP00005020720.1uncharacterized protein C16orf52 homologJBrowse
1920at6073Complete568.3293.0ENSORFP00005013903.1kidney mitochondrial carrier protein 1JBrowse
1944at6073Fragmented515.1230.0ENSORFP00005025090.1mitogen-activated protein kinase 14JBrowse
1962at6073Complete109.391.0ENSORFP00005013334.1SH3 domain-binding glutamic acid-rich 3JBrowse
2051at6073Fragmented620.1337.0ENSORFP00005030876.1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Fragmented269.4152.0ENSORFP00005015202.1mitochondrial inner membrane protease ATP23JBrowse
2062at6073Complete441.3293.0ENSORFP00005007127.1transcription factor Sox-3JBrowse
2093at6073Complete921.9482.0ENSORFP00005022118.1protein O-glucosyltransferase 2JBrowse
2095at6073Fragmented888.7442.0ENSORFP00005044255.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Duplicated513.8311.0ENSORFP00005011474.1protein FAM228BJBrowse
2197at6073Duplicated458.0311.0ENSORFP00005011471.1protein FAM228BJBrowse
2201at6073Complete639.2460.0ENSORFP00005021589.1vesicular glutamate transporter 2JBrowse
2225at6073Duplicated342.2193.0ENSORFP00005026083.1protein Hikeshi-likeJBrowse
2225at6073Duplicated327.7187.0ENSORFP00005039543.1protein Hikeshi-likeJBrowse
2225at6073Duplicated327.7187.0ENSORFP00005052970.1protein Hikeshi-likeJBrowse
2225at6073Duplicated321.5185.0ENSORFP00005039535.1protein Hikeshi-likeJBrowse
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