BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2841at6073Complete689.1449.0acyt_s0004.g170.t1F-box/LRR-repeat protein 2-likeJBrowse
2853at6073Fragmented617.9336.0acyt_s0004.g146.t2WD repeat-containing protein 20JBrowse
2867at6073Complete2303.81341.0acyt_s0236.g38.t1uncharacterized protein LOC113684304 isoform X1JBrowse
2886at6073Complete182.1132.0acyt_s0008.g32.t2protein LTO1 homologJBrowse
2913at6073Complete476.4263.0acyt_s0164.g18.t1homeobox protein SIX1JBrowse
2934at6073Complete1387.1613.0acyt_s0153.g53.t1V-type proton ATPase catalytic subunit AJBrowse
2987at6073Complete1825.5953.0acyt_s0096.g72.t1Vacuolar protein sorting-associated protein 18JBrowse
2993at6073Complete1010.8541.0acyt_s0134.g50.t1protein REDUCED WALL ACETYLATION 1JBrowse
3019at6073Complete385.8211.0acyt_s0002.g150.t1cilia- and flagella-associated protein 107-likeJBrowse
3025at6073Complete456.3218.0acyt_s0009.g130.t1proteasome subunit beta type-1-AJBrowse
3028at6073Complete171.6112.0acyt_s0055.g13.t1replication protein A 14 kDa subunit-likeJBrowse
3034at6073Duplicated720.5345.0acyt_s0017.g27.t1galactose-1-phosphate uridylyltransferase-likeJBrowse
3034at6073Duplicated668.2320.0acyt_s0017.g27.t2galactose-1-phosphate uridylyltransferase-likeJBrowse
3047at6073Complete459.4289.0acyt_s0178.g10.t1F-box/LRR-repeat protein 15JBrowse
3050at6073Complete536.7345.0acyt_s0111.g42.t1Peroxisomal biogenesis factor 3JBrowse
3060at6073Complete755.7465.0acyt_s0201.g17.t1pyruvate dehydrogenase JBrowse
3078at6073Complete1268.1703.0acyt_s0097.g55.t1exostosin-1-likeJBrowse
3099at6073Complete855.9512.0acyt_s0045.g168.t1prolyl 4-hydroxylase subunit alpha-1JBrowse
3107at6073Complete508.6351.0acyt_s0039.g3.t1Transcription factor SOX-17JBrowse
3112at6073Complete841.4483.0acyt_s0267.g20.t1fukutin-related protein-likeJBrowse
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