BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2987at6073Complete1826.2953.0agem_s0300.g4.t1Vacuolar protein sorting-associated protein 18JBrowse
2993at6073Complete1009.7541.0agem_s0251.g23.t1protein REDUCED WALL ACETYLATION 1JBrowse
3019at6073Complete381.8211.0agem_s0118.g28.t1cilia- and flagella-associated protein 107-likeJBrowse
3025at6073Complete454.6218.0agem_s0014.g151.t1proteasome subunit beta type-1-AJBrowse
3028at6073Complete171.6112.0agem_s0265.g7.t1replication protein A 14 kDa subunit-likeJBrowse
3034at6073Complete718.2345.0agem_s0059.g121.t1galactose-1-phosphate uridylyltransferase-likeJBrowse
3050at6073Fragmented360.2258.0agem_s0102.g25.t1Peroxisomal biogenesis factor 3JBrowse
3060at6073Complete754.9465.0agem_s0191.g11.t1pyruvate dehydrogenase JBrowse
3078at6073Complete1265.6703.0agem_s0024.g155.t1exostosin-1-likeJBrowse
3099at6073Complete870.3512.0agem_s0085.g31.t1prolyl 4-hydroxylase subunit alpha-1JBrowse
3107at6073Complete508.0351.0agem_s0058.g70.t1Transcription factor SOX-17JBrowse
3112at6073Complete839.3483.0agem_s0578.g4.t1fukutin-related protein-likeJBrowse
3114at6073Complete507.5285.0agem_s0002.g175.t1General transcription factor IIH subunit 3JBrowse
3139at6073Complete640.1373.0agem_s0252.g1.t1THUMP domain-containing 3JBrowse
3142at6073Complete256.9194.0agem_s0006.g70.t1homeobox protein MOX-1JBrowse
3154at6073Complete328.0161.0agem_s0874.g3.t1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3172at6073Complete713.0366.0agem_s0248.g24.t1PR domain zinc finger protein 12JBrowse
3185at6073Complete862.4427.0agem_s0297.g4.t1FAD/NAD(P)-binding domainJBrowse
3192at6073Complete335.7159.0agem_s0111.g22.t1N-alpha-acetyltransferase 50JBrowse
3247at6073Complete664.4344.0agem_s0138.g36.t1Geranylgeranyl transferase type-1 subunit betaJBrowse
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