BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2993at6073Complete1011.0541.0aint_s0072.g23.t1protein REDUCED WALL ACETYLATION 1JBrowse
3019at6073Complete386.5211.0aint_s0035.g38.t1cilia- and flagella-associated protein 107-likeJBrowse
3025at6073Fragmented289.1139.0aint_s0022.g39.t1proteasome subunit beta type-1-AJBrowse
3028at6073Duplicated171.6112.0aint_s0330.g10.t1replication protein A 14 kDa subunit-likeJBrowse
3028at6073Duplicated171.6112.0aint_s0330.g10.t2replication protein A 14 kDa subunit-likeJBrowse
3034at6073Duplicated715.5345.0aint_s0015.g44.t1galactose-1-phosphate uridylyltransferase-likeJBrowse
3034at6073Duplicated663.2320.0aint_s0015.g44.t2galactose-1-phosphate uridylyltransferase-likeJBrowse
3047at6073Complete452.6289.0aint_s2013.g2.t1F-box/LRR-repeat protein 15JBrowse
3050at6073Complete433.2295.0aint_s0004.g26.t1Peroxisomal biogenesis factor 3JBrowse
3060at6073Complete756.6464.0aint_s0139.g41.t1pyruvate dehydrogenase JBrowse
3078at6073Complete1264.9703.0aint_s0083.g51.t1exostosin-1-likeJBrowse
3099at6073Complete868.5512.0aint_s0418.g4.t1prolyl 4-hydroxylase subunit alpha-1JBrowse
3107at6073Complete504.4351.0aint_s0110.g32.t1Transcription factor SOX-17JBrowse
3112at6073Complete840.8483.0aint_s0386.g7.t1fukutin-related protein-likeJBrowse
3114at6073Complete507.5285.0aint_s0135.g49.t1General transcription factor IIH subunit 3JBrowse
3139at6073Fragmented494.5273.0aint_s0294.g37.t1THUMP domain-containing 3JBrowse
3142at6073Complete257.1194.0aint_s0005.g28.t1homeobox protein MOX-1JBrowse
3154at6073Complete328.8161.0aint_s0026.g81.t1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3172at6073Complete712.8366.0aint_s0123.g30.t1PR domain zinc finger protein 12JBrowse
3185at6073Complete865.3427.0aint_s0333.g9.t1FAD/NAD(P)-binding domainJBrowse
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