BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora milleporaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 97.9% [S: 70.7%, D: 27.3%] F: 0.4%, M: 1.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,137 (97.9%)2,264 (70.7%)873 (27.3%)14 (0.4%)52 (1.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora millepora: 4,695 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2262at6073Duplicated288.5131.0XP_029201080.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Complete265.7178.0XP_029185145.2Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete929.5430.0XP_044175904.1adenosylhomocysteinase AJBrowse
2305at6073Complete495.9240.0XP_029207457.2vacuolar-sorting protein SNF8JBrowse
2333at6073Complete721.8425.0XP_029211696.1carbohydrate sulfotransferase 1JBrowse
2340at6073Complete721.5377.0XP_029202194.2Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Complete232.3105.0XP_029205989.1RING-box protein 1JBrowse
2385at6073Duplicated488.0282.0XP_029211190.2polyhomeotic-like protein 2JBrowse
2385at6073Duplicated485.5282.0XP_029211189.2polyhomeotic-like protein 2JBrowse
2419at6073Complete206.9121.0XP_029196074.1nuclear transport factor 2JBrowse
2440at6073Complete381.2224.0XP_029213307.2uncharacterized protein LOC116287038JBrowse
2456at6073Complete292.6184.0XP_029188620.2transmembrane protein 267-likeJBrowse
2501at6073Complete263.2117.0XP_029188153.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete592.4285.0XP_029192397.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Complete1156.0602.0XP_029186926.2serine/threonine-protein kinase PLK1JBrowse
2570at6073Complete498.1267.0XP_029183253.2phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Duplicated272.3231.0XP_029195738.1interferon regulatory factor 1JBrowse
2617at6073Duplicated272.3231.0XP_029195739.1interferon regulatory factor 1JBrowse
2633at6073Duplicated1348.6681.0XP_029190598.1Cleavage stimulation factor subunit 3JBrowse
2633at6073Duplicated1341.0681.0XP_029190599.1Cleavage stimulation factor subunit 3JBrowse
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