BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2062at6073Complete490.1310.0XP_074632781.1transcription factor Sox-3JBrowse
2093at6073Duplicated956.4489.0XP_074617006.1protein O-glucosyltransferase 2JBrowse
2093at6073Duplicated954.5487.0XP_074617007.1protein O-glucosyltransferase 2JBrowse
2093at6073Duplicated880.5461.0XP_074617008.1protein O-glucosyltransferase 2JBrowse
2095at6073Duplicated1291.1610.0XP_074617418.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2095at6073Duplicated1289.3610.0XP_074617419.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Complete522.2312.0XP_074624998.1protein FAM228BJBrowse
2201at6073Duplicated922.0464.0XP_074614068.1vesicular glutamate transporter 2JBrowse
2201at6073Duplicated922.0464.0XP_074614069.1vesicular glutamate transporter 2JBrowse
2201at6073Duplicated921.9464.0XP_074614067.1vesicular glutamate transporter 2JBrowse
2225at6073Complete359.9193.0XP_074617863.1protein Hikeshi-likeJBrowse
2251at6073Complete405.6249.0XP_074613193.1protein AMN1 homologJBrowse
2255at6073Complete1263.7581.0XP_074616175.1Kelch repeat type 1JBrowse
2262at6073Complete318.8146.0XP_074626285.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Complete262.1178.0XP_074632920.1Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete934.5430.0XP_074617763.1adenosylhomocysteinase AJBrowse
2305at6073Complete495.6240.0XP_074622320.1vacuolar-sorting protein SNF8JBrowse
2333at6073Complete722.1425.0XP_074631251.1carbohydrate sulfotransferase 1JBrowse
2340at6073Complete721.8377.0XP_074639635.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Complete232.8105.0XP_074619896.1RING-box protein 1JBrowse
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