BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3050at6073Complete536.0345.0FUN_034128-T1Peroxisomal biogenesis factor 3JBrowse
3060at6073Complete754.0465.0FUN_027066-T1pyruvate dehydrogenase JBrowse
3078at6073Complete1267.4703.0FUN_008934-T1exostosin-1-likeJBrowse
3099at6073Complete807.0512.0FUN_033215-T1prolyl 4-hydroxylase subunit alpha-1JBrowse
3107at6073Complete505.5351.0FUN_000542-T1Transcription factor SOX-17JBrowse
3112at6073Complete842.5483.0FUN_018531-T1fukutin-related protein-likeJBrowse
3114at6073Complete509.0285.0FUN_014899-T1General transcription factor IIH subunit 3JBrowse
3139at6073Complete635.5373.0FUN_031707-T2THUMP domain-containing 3JBrowse
3142at6073Complete253.4185.0FUN_026028-T1homeobox protein MOX-1JBrowse
3154at6073Complete327.3161.0FUN_023945-T1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3172at6073Complete714.4366.0FUN_039873-T1PR domain zinc finger protein 12JBrowse
3185at6073Complete868.5427.0FUN_032533-T1FAD/NAD(P)-binding domainJBrowse
3192at6073Complete335.7159.0FUN_041312-T1N-alpha-acetyltransferase 50JBrowse
3247at6073Complete668.1344.0FUN_040443-T1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Complete692.1339.0FUN_034967-T1nucleoporin SEH1-likeJBrowse
3337at6073Complete1092.4503.0FUN_015008-T1pre-mRNA-processing factor 19JBrowse
3345at6073Complete549.9288.0FUN_025561-T1Forkhead box protein L2JBrowse
3346at6073Complete633.6306.0FUN_012969-T1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Complete695.6411.0FUN_034797-T1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Complete575.0297.0FUN_043311-T1protein FAM166B-likeJBrowse
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