BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1920at6073Duplicated497.9292.0g9051.t1.1kidney mitochondrial carrier protein 1JBrowse
1944at6073Duplicated568.6318.0BRAKERHOCP00005019001.1mitogen-activated protein kinase 14JBrowse
1944at6073Duplicated568.6318.0g10134.t1.1mitogen-activated protein kinase 14JBrowse
1962at6073Duplicated144.890.0BRAKERHOCP00005015306.1SH3 domain-binding glutamic acid-rich 3JBrowse
1962at6073Duplicated144.890.0g16496.t1.1SH3 domain-binding glutamic acid-rich 3JBrowse
2020at6073Duplicated273.8203.0BRAKERHOCP00005014927.1DNA replication complex GINS protein PSF3-likeJBrowse
2020at6073Duplicated273.8203.0g18114.t1.1DNA replication complex GINS protein PSF3-likeJBrowse
2051at6073Duplicated661.4559.0BRAKERHOCP00005009301.1Fucose-1-phosphate guanylyltransferaseJBrowse
2051at6073Duplicated661.4559.0g4423.t1.1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Duplicated322.2184.0BRAKERHOCP00005009343.1mitochondrial inner membrane protease ATP23JBrowse
2052at6073Duplicated322.2184.0g1753.t1.1mitochondrial inner membrane protease ATP23JBrowse
2062at6073Fragmented226.4225.0BRAKERHOCP00005020528.1transcription factor Sox-3JBrowse
2093at6073Duplicated765.6485.0BRAKERHOCP00005016201.1protein O-glucosyltransferase 2JBrowse
2093at6073Duplicated765.6485.0g17541.t1.1protein O-glucosyltransferase 2JBrowse
2095at6073Duplicated1152.2610.0BRAKERHOCP00005001356.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2095at6073Duplicated1152.2610.0g7499.t1.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2201at6073Duplicated800.3448.0BRAKERHOCP00005017102.1vesicular glutamate transporter 2JBrowse
2201at6073Duplicated800.3448.0g1590.t1.1vesicular glutamate transporter 2JBrowse
2225at6073Duplicated288.0192.0BRAKERHOCP00005003264.1protein Hikeshi-likeJBrowse
2225at6073Duplicated288.0192.0g7292.t1.1protein Hikeshi-likeJBrowse
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