BUSCO Gene Details in Orbicella faveolata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Orbicella faveolataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.6% [S: 72.7%, D: 16.8%] F: 8.5%, M: 1.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,869 (89.6%)2,330 (72.7%)539 (16.8%)273 (8.5%)61 (1.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Orbicella faveolata: 3,961 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2440at6073Fragmented287.5165.0XP_020617188.1uncharacterized protein LOC116287038JBrowse
2456at6073Complete291.3186.0XP_020615523.1transmembrane protein 267-likeJBrowse
2501at6073Complete263.0117.0XP_020624609.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete589.1285.0XP_020629044.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Fragmented833.4432.0XP_020631740.1serine/threonine-protein kinase PLK1JBrowse
2570at6073Complete498.2267.0XP_020614568.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Complete289.4240.0XP_020617859.1interferon regulatory factor 1JBrowse
2633at6073Complete1374.6681.0XP_020601880.1Cleavage stimulation factor subunit 3JBrowse
2653at6073Complete683.0366.0XP_020618186.1E3 ubiquitin-protein ligase FANCLJBrowse
2655at6073Complete313.5160.0XP_020621849.1protein CFAP276JBrowse
2680at6073Complete445.4192.0XP_020604067.1Cilia- and flagella-associated protein 20JBrowse
2694at6073Complete273.1128.0XP_020611754.1Large ribosomal subunit protein eL40 domainJBrowse
2715at6073Complete375.5165.0XP_020631254.1ras-related protein Rab-2JBrowse
2721at6073Complete1817.4884.0XP_020624693.1glycine dehydrogenase (decarboxylating), mitochondrialJBrowse
2729at6073Complete1144.2565.0XP_020604158.1kelch-like protein 5JBrowse
2733at6073Complete626.7346.0XP_020625618.1queuosine salvage proteinJBrowse
2778at6073Complete575.0279.0XP_020619791.1cyclin-C-likeJBrowse
2807at6073Duplicated534.1269.0XP_020618324.1Protein yif1bJBrowse
2807at6073Duplicated533.9269.0XP_020618323.1Protein yif1bJBrowse
2807at6073Duplicated533.7269.0XP_020618322.1Protein yif1bJBrowse
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