BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2225at6073Duplicated321.5185.0ENSORFP00005052960.1protein Hikeshi-likeJBrowse
2251at6073Complete350.8249.0ENSORFP00005038269.1protein AMN1 homologJBrowse
2255at6073Duplicated1261.3579.0ENSORFP00005037684.1Kelch repeat type 1JBrowse
2255at6073Duplicated1245.2569.0ENSORFP00005047651.1Kelch repeat type 1JBrowse
2262at6073Duplicated317.0146.0ENSORFP00005004151.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2262at6073Duplicated296.1134.0ENSORFP00005004157.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Duplicated247.2178.0ENSORFP00005033245.1Dynein heavy chain AAA lid domainJBrowse
2281at6073Duplicated247.2178.0ENSORFP00005043625.1Dynein heavy chain AAA lid domainJBrowse
2281at6073Duplicated247.0178.0ENSORFP00005051346.1Dynein heavy chain AAA lid domainJBrowse
2297at6073Duplicated930.5430.0ENSORFP00005031714.1adenosylhomocysteinase AJBrowse
2297at6073Duplicated927.3429.0ENSORFP00005031721.1adenosylhomocysteinase AJBrowse
2305at6073Complete484.9241.0ENSORFP00005029023.1vacuolar-sorting protein SNF8JBrowse
2340at6073Complete688.2376.0ENSORFP00005030336.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Complete232.5105.0ENSORFP00005020814.1RING-box protein 1JBrowse
2385at6073Fragmented245.8183.0ENSORFP00005004527.1polyhomeotic-like protein 2JBrowse
2419at6073Complete181.8120.0ENSORFP00005006610.1nuclear transport factor 2JBrowse
2440at6073Duplicated362.6226.0ENSORFP00005010456.1uncharacterized protein LOC116287038JBrowse
2440at6073Duplicated326.4201.0ENSORFP00005010463.1uncharacterized protein LOC116287038JBrowse
2456at6073Complete255.7184.0ENSORFP00005010985.1transmembrane protein 267-likeJBrowse
2501at6073Duplicated262.9117.0ENSORFP00005017772.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
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