BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3114at6073Duplicated507.4285.0acyt_s0021.g78.t1General transcription factor IIH subunit 3JBrowse
3114at6073Duplicated505.6285.0acyt_s0021.g78.t2General transcription factor IIH subunit 3JBrowse
3139at6073Fragmented496.2264.0acyt_s0261.g39.t1THUMP domain-containing 3JBrowse
3142at6073Complete257.0194.0acyt_s0017.g73.t1homeobox protein MOX-1JBrowse
3154at6073Complete328.0161.0acyt_s0293.g21.t1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3172at6073Complete714.4366.0acyt_s0041.g123.t1PR domain zinc finger protein 12JBrowse
3192at6073Complete335.7159.0acyt_s0144.g10.t1N-alpha-acetyltransferase 50JBrowse
3247at6073Complete668.5344.0acyt_s0304.g7.t1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Complete704.0339.0acyt_s0148.g30.t1nucleoporin SEH1-likeJBrowse
3337at6073Complete1092.7503.0acyt_s0021.g205.t1pre-mRNA-processing factor 19JBrowse
3345at6073Complete549.9288.0acyt_s0032.g161.t1Forkhead box protein L2JBrowse
3346at6073Duplicated617.2306.0acyt_s0254.g4.t1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated619.9304.0acyt_s0254.g4.t2mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Complete698.0411.0acyt_s0305.g24.t1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Complete575.0297.0acyt_s0023.g114.t1protein FAM166B-likeJBrowse
3507at6073Complete319.1175.0acyt_s0007.g57.t1lactoylglutathione lyase-likeJBrowse
3517at6073Duplicated466.7272.0acyt_s0784.g3.t139S ribosomal protein L38, mitochondrial-likeJBrowse
3517at6073Duplicated460.5272.0acyt_s0210.g12.t139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete207.7105.0acyt_s0173.g55.t160S ribosomal protein L44JBrowse
3527at6073Duplicated1106.4674.0acyt_s0078.g36.t2short transient receptor potential channel 4-associated proteinJBrowse
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