BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3247at6073Complete664.7344.0aint_s0349.g18.t1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Complete702.5339.0aint_s0362.g17.t1nucleoporin SEH1-likeJBrowse
3337at6073Complete1088.8503.0aint_s0054.g82.t1pre-mRNA-processing factor 19JBrowse
3345at6073Complete549.9288.0aint_s0106.g41.t1Forkhead box protein L2JBrowse
3346at6073Duplicated634.2306.0aint_s0632.g2.t1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated636.8304.0aint_s0632.g2.t2mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Complete695.4411.0aint_s0471.g22.t1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Complete573.9297.0aint_s0069.g19.t1protein FAM166B-likeJBrowse
3507at6073Complete319.4175.0aint_s0109.g17.t1lactoylglutathione lyase-likeJBrowse
3517at6073Complete461.5271.0aint_s0068.g52.t139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete207.7105.0aint_s0328.g16.t160S ribosomal protein L44JBrowse
3527at6073Duplicated1104.5674.0aint_s0068.g6.t2short transient receptor potential channel 4-associated proteinJBrowse
3527at6073Duplicated1100.1674.0aint_s0068.g6.t1short transient receptor potential channel 4-associated proteinJBrowse
3561at6073Duplicated702.5387.0aint_s0086.g6.t2spermatogenesis-associated protein 48JBrowse
3561at6073Duplicated675.1387.0aint_s0086.g6.t1spermatogenesis-associated protein 48JBrowse
3582at6073Complete993.9438.0aint_s0836.g1.t1AP-2 complex subunit muJBrowse
3598at6073Complete629.4276.0aint_s0013.g48.t1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Complete287.3178.0aint_s0135.g15.t139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Complete1621.3859.0aint_s0351.g27.t1Peripheral plasma membrane CASKJBrowse
3682at6073Complete486.6301.0aint_s0015.g63.t1metaxin-1JBrowse
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