BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3345at6073Complete549.9288.0alor_g24970.t1Forkhead box protein L2JBrowse
3346at6073Duplicated633.0306.0alor_g17756.t2mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated635.5304.0alor_g17756.t1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Complete696.3411.0alor_g1731.t1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Complete573.8297.0alor_g16060.t1protein FAM166B-likeJBrowse
3507at6073Complete319.1175.0alor_g17769.t1lactoylglutathione lyase-likeJBrowse
3517at6073Complete461.2280.0alor_g13505.t139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete207.7105.0alor_g21339.t160S ribosomal protein L44JBrowse
3527at6073Duplicated1072.8674.0alor_g19495.t2short transient receptor potential channel 4-associated proteinJBrowse
3527at6073Duplicated991.8649.0alor_g19495.t1short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Complete917.4433.0alor_g3528.t1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Complete616.2387.0alor_g19083.t1spermatogenesis-associated protein 48JBrowse
3570at6073Complete315.5173.0alor_g12020.t1ras-related protein Rab-13 isoform X1JBrowse
3576at6073Complete667.4342.0alor_g23470.t1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Complete993.9438.0alor_g15198.t1AP-2 complex subunit muJBrowse
3598at6073Complete606.3259.0alor_g1364.t1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Complete286.7178.0alor_g24526.t139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Complete1488.3792.0alor_g25504.t1Peripheral plasma membrane CASKJBrowse
3682at6073Complete484.7301.0alor_g6208.t1metaxin-1JBrowse
3691at6073Complete678.8374.0alor_g3366.t1Soluble calcium-activated nucleotidase 1JBrowse
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