BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3172at6073Complete713.1366.0amic_s0189.g16.t1PR domain zinc finger protein 12JBrowse
3185at6073Complete861.3427.0amic_s0126.g26.t1FAD/NAD(P)-binding domainJBrowse
3192at6073Complete335.7159.0amic_s0363.g8.t1N-alpha-acetyltransferase 50JBrowse
3247at6073Complete668.1344.0amic_s0076.g36.t1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Fragmented512.5273.0amic_s0112.g53.t1nucleoporin SEH1-likeJBrowse
3337at6073Complete1092.4503.0amic_s0161.g48.t1pre-mRNA-processing factor 19JBrowse
3345at6073Complete549.9288.0amic_s0037.g79.t1Forkhead box protein L2JBrowse
3346at6073Duplicated633.7306.0amic_s0233.g4.t1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated636.2304.0amic_s0233.g4.t2mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3490at6073Complete575.0297.0amic_s0047.g69.t1protein FAM166B-likeJBrowse
3507at6073Complete319.1175.0amic_s0228.g2.t1lactoylglutathione lyase-likeJBrowse
3517at6073Complete464.4272.0amic_s0002.g231.t139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete207.7105.0amic_s0083.g79.t160S ribosomal protein L44JBrowse
3527at6073Duplicated1104.9674.0amic_s0002.g180.t1short transient receptor potential channel 4-associated proteinJBrowse
3527at6073Duplicated1100.5674.0amic_s0002.g180.t2short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Complete917.4433.0amic_s0023.g230.t1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Duplicated677.4387.0amic_s0281.g12.t1spermatogenesis-associated protein 48JBrowse
3561at6073Duplicated675.6387.0amic_s0281.g18.t1spermatogenesis-associated protein 48JBrowse
3576at6073Complete665.4342.0amic_s0025.g54.t1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Duplicated974.8438.0amic_s0276.g9.t1AP-2 complex subunit muJBrowse
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