BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2385at6073Complete485.5282.0XP_074625643.1polyhomeotic-like protein 2JBrowse
2419at6073Complete201.0121.0XP_074622876.1nuclear transport factor 2JBrowse
2440at6073Complete381.4224.0XP_074611518.1uncharacterized protein LOC116287038JBrowse
2456at6073Complete286.8184.0XP_074615411.1transmembrane protein 267-likeJBrowse
2501at6073Complete263.2117.0XP_074619012.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete591.5285.0XP_074636207.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Complete1155.8602.0XP_074617371.1serine/threonine-protein kinase PLK1JBrowse
2570at6073Complete492.8267.0XP_074615351.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Duplicated273.3231.0XP_074606909.1interferon regulatory factor 1JBrowse
2617at6073Duplicated273.3231.0XP_074606910.1interferon regulatory factor 1JBrowse
2633at6073Duplicated1347.6681.0XP_074613165.1Cleavage stimulation factor subunit 3JBrowse
2633at6073Duplicated1340.0681.0XP_074613166.1Cleavage stimulation factor subunit 3JBrowse
2653at6073Duplicated653.5368.0XP_074630538.1E3 ubiquitin-protein ligase FANCLJBrowse
2653at6073Duplicated628.5368.0XP_074630537.1E3 ubiquitin-protein ligase FANCLJBrowse
2653at6073Duplicated568.7324.0XP_074630539.1E3 ubiquitin-protein ligase FANCLJBrowse
2655at6073Complete306.9160.0XP_074608550.1protein CFAP276JBrowse
2680at6073Complete444.1192.0XP_074616035.1Cilia- and flagella-associated protein 20JBrowse
2694at6073Complete273.1128.0XP_074634390.1Large ribosomal subunit protein eL40 domainJBrowse
2715at6073Complete375.5165.0XP_074616945.1ras-related protein Rab-2JBrowse
2721at6073Complete1909.2952.0XP_074611635.1glycine dehydrogenase (decarboxylating), mitochondrialJBrowse
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