BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3507at6073Complete316.1173.0FUN_007337-T1lactoylglutathione lyase-likeJBrowse
3517at6073Complete492.2317.0FUN_035917-T139S ribosomal protein L38, mitochondrial-likeJBrowse
3527at6073Complete1129.8698.0FUN_035865-T1short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Complete917.4433.0FUN_041759-T1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Complete672.1387.0FUN_026629-T1spermatogenesis-associated protein 48JBrowse
3570at6073Complete332.1175.0FUN_000371-T1ras-related protein Rab-13 isoform X1JBrowse
3576at6073Complete665.4342.0FUN_012560-T1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Complete993.9438.0FUN_025661-T1AP-2 complex subunit muJBrowse
3598at6073Complete629.4276.0FUN_037231-T1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Duplicated288.1178.0FUN_014857-T139S ribosomal protein L18, mitochondrial-likeJBrowse
3641at6073Duplicated287.5178.0FUN_014857-T239S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Complete1619.9859.0FUN_041565-T1Peripheral plasma membrane CASKJBrowse
3682at6073Complete485.3301.0FUN_004553-T1metaxin-1JBrowse
3691at6073Complete641.3357.0FUN_033695-T1Soluble calcium-activated nucleotidase 1JBrowse
3702at6073Complete257.3176.0FUN_010781-T1Eukaryotic translation elongation factor 1 epsilon-1JBrowse
3707at6073Complete469.3272.0FUN_014955-T1protein rogdi homologJBrowse
3738at6073Complete717.6399.0FUN_007923-T1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3752at6073Complete193.185.0FUN_023948-T1ubiquitin-fold modifier 1JBrowse
3768at6073Complete1285.4640.0FUN_033762-T1glycogen JBrowse
3797at6073Complete544.8315.0FUN_042828-T1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
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