BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3691at6073Complete574.6337.0HOLI03152.G38996Soluble calcium-activated nucleotidase 1JBrowse
3707at6073Complete393.2270.0HOLI00144.G58552protein rogdi homologJBrowse
3738at6073Complete598.1399.0HOLI01068.G23871E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3752at6073Complete184.384.0HOLI00162.G41529ubiquitin-fold modifier 1JBrowse
3768at6073Complete1157.4641.0HOLI04053.G14780glycogen JBrowse
3797at6073Complete348.3284.0HOLI01234.G46234mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3805at6073Complete514.7366.0HOLI01137.G12224nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Complete556.1410.0HOLI01633.G12243F-box/LRR-repeat protein 20JBrowse
3848at6073Complete811.3413.0HOLI00282.G291755-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3897at6073Complete349.0300.0HOLI02710.G45272tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3911at6073Complete753.7528.0HOLI00438.G43965Gamma-tubulin complex component 4JBrowse
3924at6073Complete151.076.0HOLI00525.G8324signal recognition particle 9 kDa proteinJBrowse
4079at6073Complete225.6206.0HOLI01465.G27714sorting nexin-10B-likeJBrowse
4090at6073Complete249.3220.0HOLI00221.G10764noggin-likeJBrowse
4117at6073Complete428.1213.0HOLI00842.G17208ras-related protein Rab-5B-likeJBrowse
4122at6073Complete303.9155.0HOLI01909.G4294Trafficking protein particle complex subunit 3JBrowse
4138at6073Duplicated881.3426.0HOLI02265.G7048isocitrate dehydrogenase JBrowse
4138at6073Duplicated881.3426.0HOLI02502.G7141isocitrate dehydrogenase JBrowse
4148at6073Complete608.9483.0HOLI00053.G57440sphingosine kinase 2-likeJBrowse
4192at6073Complete729.0575.0HOLI01094.G31603Prolyl 3-hydroxylase 2JBrowse
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