BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3337at6073Complete1051.3502.0CAB3980346.1pre-mRNA-processing factor 19JBrowse
3345at6073Complete414.6258.0CAB3979433.1Forkhead box protein L2JBrowse
3482at6073Complete626.1410.0CAB3995997.1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Duplicated530.8296.0CAB4005477.1protein FAM166B-likeJBrowse
3490at6073Duplicated498.2280.0CAB4005478.1protein FAM166B-likeJBrowse
3507at6073Complete326.0175.0CAB4020904.1lactoylglutathione lyase-likeJBrowse
3517at6073Complete477.4318.0CAB4000169.139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete211.2105.0CAB3990598.160S ribosomal protein L44JBrowse
3527at6073Complete1075.7698.0CAB3993791.1short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Complete891.7433.0CAB4022458.1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Fragmented176.3145.0CAB4033927.1spermatogenesis-associated protein 48JBrowse
3570at6073Duplicated343.1176.0CAB4003570.1ras-related protein Rab-13 isoform X1JBrowse
3570at6073Duplicated321.1176.0CAB4000093.1ras-related protein Rab-13 isoform X1JBrowse
3576at6073Complete634.2333.0CAB3989330.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Duplicated780.4398.0CAB4019304.1AP-2 complex subunit muJBrowse
3582at6073Duplicated778.0394.0CAB4019305.1AP-2 complex subunit muJBrowse
3598at6073Complete603.2276.0CAB4000328.1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Complete271.3175.0CAB4002009.139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Complete1404.8783.0CAB3991124.1Peripheral plasma membrane CASKJBrowse
3682at6073Complete454.0304.0CAB4002361.1metaxin-1JBrowse
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