BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2501at6073Duplicated262.0117.0ENSORFP00005017763.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Duplicated562.3285.0ENSORFP00005012983.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2559at6073Duplicated562.3285.0ENSORFP00005031808.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2559at6073Duplicated562.3285.0ENSORFP00005048216.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Duplicated1109.3601.0ENSORFP00005021607.1serine/threonine-protein kinase PLK1JBrowse
2568at6073Duplicated988.1532.0ENSORFP00005021619.1serine/threonine-protein kinase PLK1JBrowse
2568at6073Duplicated988.1532.0ENSORFP00005021623.1serine/threonine-protein kinase PLK1JBrowse
2570at6073Duplicated479.3267.0ENSORFP00005038224.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2570at6073Duplicated479.3267.0ENSORFP00005038230.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2570at6073Duplicated479.3267.0ENSORFP00005050953.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2570at6073Duplicated479.3267.0ENSORFP00005050963.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2570at6073Duplicated479.2267.0ENSORFP00005039742.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Fragmented231.9148.0ENSORFP00005030576.1interferon regulatory factor 1JBrowse
2633at6073Complete1309.0681.0ENSORFP00005026656.1Cleavage stimulation factor subunit 3JBrowse
2653at6073Complete640.1366.0ENSORFP00005023200.1E3 ubiquitin-protein ligase FANCLJBrowse
2655at6073Duplicated301.8160.0ENSORFP00005032365.1protein CFAP276JBrowse
2655at6073Duplicated259.7138.0ENSORFP00005032354.1protein CFAP276JBrowse
2680at6073Complete440.9191.0ENSORFP00005019186.1Cilia- and flagella-associated protein 20JBrowse
2694at6073Duplicated272.8128.0ENSORFP00005000893.1Large ribosomal subunit protein eL40 domainJBrowse
2694at6073Duplicated272.1128.0ENSORFP00005000899.1Large ribosomal subunit protein eL40 domainJBrowse
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