BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3192at6073Complete315.0159.0NY_Scal100_v1.5903.1N-alpha-acetyltransferase 50JBrowse
3247at6073Fragmented457.9237.0NY_Scal100_v1.45251.1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Fragmented433.6259.0NY_Scal100_v1.8813.1nucleoporin SEH1-likeJBrowse
3337at6073Duplicated1031.9503.0NY_Scal100_v1.30919.1pre-mRNA-processing factor 19JBrowse
3337at6073Duplicated996.5503.0NY_Scal100_v1.8662.1pre-mRNA-processing factor 19JBrowse
3345at6073Complete495.3288.0NY_Scal100_v1.34545.1Forkhead box protein L2JBrowse
3346at6073Complete492.0276.0NY_Scal100_v1.33861.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Complete637.7411.0NY_Scal100_v1.32018.1E3 ubiquitin-protein ligase MYLIPJBrowse
3507at6073Duplicated303.6175.0NY_Scal100_v1.16027.1lactoylglutathione lyase-likeJBrowse
3507at6073Duplicated303.3175.0NY_Scal100_v1.27713.1lactoylglutathione lyase-likeJBrowse
3517at6073Complete395.5296.0NY_Scal100_v1.13131.139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Duplicated213.2105.0NY_Scal100_v1.11144.160S ribosomal protein L44JBrowse
3526at6073Duplicated213.2105.0NY_Scal100_v1.14773.160S ribosomal protein L44JBrowse
3527at6073Complete1043.7674.0NY_Scal100_v1.7997.1short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Complete786.0372.0NY_Scal100_v1.11043.1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Complete592.4378.0NY_Scal100_v1.1433.1spermatogenesis-associated protein 48JBrowse
3570at6073Complete320.9178.0NY_Scal100_v1.34510.1ras-related protein Rab-13 isoform X1JBrowse
3576at6073Complete459.6286.0NY_Scal100_v1.24802.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Complete982.9438.0NY_Scal100_v1.33494.1AP-2 complex subunit muJBrowse
3663at6073Duplicated1337.2824.0NY_Scal100_v1.5768.1Peripheral plasma membrane CASKJBrowse
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