BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
72725at6073Complete1842.6971.0pspe_0.1.m1.51906.m1WASH complex subunit 4JBrowse
72731at6073Complete350.7122.0pspe_0.1.m1.19816.m1centromere protein V-likeJBrowse
72737at6073Complete356.9195.0pspe_0.1.m1.44598.m1rho GDP-dissociation inhibitor 1JBrowse
72743at6073Duplicated739.7445.0pspe_0.1.m1.48407.m1serine hydroxymethyltransferase, mitochondrialJBrowse
72743at6073Duplicated857.9426.0pspe_0.1.m1.52365.m1serine hydroxymethyltransferase, mitochondrialJBrowse
72744at6073Complete660.1369.0pspe_0.1.m1.56277.m1cholinephosphotransferase 1-likeJBrowse
72747at6073Complete390.1213.0pspe_0.1.m1.26819.m1programmed cell death protein 10JBrowse
72754at6073Complete699.6363.0pspe_0.1.m1.39100.m1sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating-likeJBrowse
72759at6073Complete299.7143.0pspe_0.1.m1.20567.m160S ribosomal protein L27AJBrowse
72764at6073Fragmented164.382.0pspe_0.1.m1.37726.m1NADH dehydrogenase JBrowse
72772at6073Complete2419.31341.0pspe_0.1.m1.35816.m1maestro heat-like repeat-containing protein family member 1JBrowse
72777at6073Complete915.8467.0pspe_0.1.m1.39874.m1Histone-arginine methyltransferase carm1JBrowse
72780at6073Complete964.9460.0pspe_0.1.m1.14642.m1nucleolar protein 56JBrowse
72781at6073Complete283.9148.0pspe_0.1.m1.48900.m1oligosaccharyltransferase complex subunit ostcJBrowse
72789at6073Complete529.6302.0pspe_0.1.m1.46986.m1solute carrier family 25 member 36-AJBrowse
72791at6073Complete1268.7614.0pspe_0.1.m1.58982.m12-hydroxyacyl-CoA lyase 2JBrowse
72792at6073Complete995.0601.0pspe_0.1.m1.41039.m1ultraviolet-B receptor UVR8-likeJBrowse
72793at6073Complete157.5209.0pspe_0.1.m1.27326.m1chloride intracellular channel protein 2-likeJBrowse
72796at6073Fragmented522.9271.0pspe_0.1.m1.40319.m1casein kinase IJBrowse
72798at6073Complete407.7202.0pspe_0.1.m1.47568.m1U1 small nuclear ribonucleoprotein AJBrowse
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