BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
72802at6073Complete492.1257.0pspe_0.1.m1.18096.m1enkurinJBrowse
72804at6073Complete771.1388.0pspe_0.1.m1.7515.m126S proteasome non-ATPase regulatory subunit 6JBrowse
72808at6073Complete398.6215.0pspe_0.1.m1.27366.m1eukaryotic translation initiation factor 3 subunit KJBrowse
72810at6073Complete565.8275.0pspe_0.1.m1.48106.m1probable 18S rRNA (guanine-N(7))-methyltransferaseJBrowse
72811at6073Fragmented486.9244.0pspe_0.1.m1.57867.m126S proteasome non-ATPase regulatory subunit 13JBrowse
72814at6073Complete605.2301.0pspe_0.1.m1.52587.m1WD repeat domain-containing protein 83JBrowse
72817at6073Complete1588.5871.0pspe_0.1.m1.30359.m1neutral alpha-glucosidase ABJBrowse
72818at6073Complete545.1275.0pspe_0.1.m1.20735.m1omega-amidase NIT2-likeJBrowse
72827at6073Fragmented1126.5649.0pspe_0.1.m1.16668.m1myotubularin-related protein 2-likeJBrowse
72829at6073Fragmented1210.0655.0pspe_0.1.m1.57139.m1periodic tryptophan protein 2 homologJBrowse
72834at6073Complete405.2220.0pspe_0.1.m1.20421.m1protein unc-50 homologJBrowse
72835at6073Complete802.4461.0pspe_0.1.m1.44074.m1oxidative stress-induced growth inhibitor 1JBrowse
72836at6073Complete689.2349.0pspe_0.1.m1.17462.m1L-threonine 3-dehydrogenase, mitochondrialJBrowse
72840at6073Complete734.4358.0pspe_0.1.m1.49692.m1fructose-bisphosphate aldolase AJBrowse
72843at6073Fragmented553.7306.0pspe_0.1.m1.6071.m1BRO1 domain-containing protein BROXJBrowse
72844at6073Complete652.8385.0pspe_0.1.m1.40495.m1tyrosine-protein kinase CSKJBrowse
72846at6073Complete569.2289.0pspe_0.1.m1.35305.m1GPN-loop GTPase 2JBrowse
72847at6073Complete333.5182.0pspe_0.1.m1.56148.m1PRELI domain-containing protein 1, mitochondrialJBrowse
72860at6073Fragmented735.2393.0pspe_0.1.m1.24818.m1integrator complex subunit 9JBrowse
72863at6073Complete1037.6562.0pspe_0.1.m1.49341.m1uncharacterized protein LOC116286838JBrowse
Go to page: of 151 pages
TOP