BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
72868at6073Complete617.2345.0pspe_0.1.m1.39537.m1protein Wnt-3a-likeJBrowse
72869at6073Duplicated499.1264.0pspe_0.1.m1.39064.m1phosphatidylinositol transfer protein alpha isoformJBrowse
72869at6073Duplicated480.3264.0pspe_0.1.m1.39063.m1phosphatidylinositol transfer protein alpha isoformJBrowse
72881at6073Complete893.0492.0pspe_0.1.m1.58642.m1H/ACA ribonucleoprotein complex subunit cbf5-likeJBrowse
72882at6073Complete2787.91584.0pspe_0.1.m1.59149.m1protein MON2 homologJBrowse
72884at6073Complete419.5239.0pspe_0.1.m1.6135.m1tetraspanin-33-likeJBrowse
72887at6073Complete1293.3623.0pspe_0.1.m1.5384.m1methylenetetrahydrofolate reductaseJBrowse
72889at6073Complete795.5412.0pspe_0.1.m1.39162.m1TBC1 domain family member 13JBrowse
72891at6073Complete197.2200.0pspe_0.1.m1.19071.m1Transmembrane emp24 domain-containing protein 7JBrowse
72900at6073Complete530.3303.0pspe_0.1.m1.25189.m1probable protein phosphatase 2C T23F11.1JBrowse
72903at6073Complete230.4124.0pspe_0.1.m1.40311.m1NADH dehydrogenase 1 alpha subcomplex subunit 13 ndufa13/GRIM19JBrowse
72907at6073Complete1212.4577.0pspe_0.1.m1.52560.m1CTP synthase 1-likeJBrowse
72917at6073Complete1007.2524.0pspe_0.1.m1.52932.m1serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-likeJBrowse
72920at6073Complete1712.5879.0pspe_0.1.m1.36213.m1non-lysosomal glucosylceramidase-likeJBrowse
72926at6073Complete2133.51138.0pspe_0.1.m1.36593.m1calcium-dependent secretion activator 1JBrowse
72933at6073Complete1073.5560.0pspe_0.1.m1.31546.m1BTB/POZ domain-containing protein 9JBrowse
72934at6073Complete1322.4699.0pspe_0.1.m1.5878.m1long-chain-fatty-acid--CoA ligase 4JBrowse
72936at6073Complete467.8226.0pspe_0.1.m1.59589.m1Proteasome subunit beta type-6JBrowse
72943at6073Complete1354.0698.0pspe_0.1.m1.14709.m1ATP-binding cassette sub-family D member 2JBrowse
72945at6073Complete504.3251.0pspe_0.1.m1.6778.m1S-methyl-5 -thioadenosine phosphorylaseJBrowse
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