BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Complete855.1361.0XP_074620953.1testin-likeJBrowse
65at6073Complete469.7232.0XP_074637248.1MORN repeat-containing protein 3JBrowse
84at6073Complete349.8157.0XP_074605921.1SUMO-conjugating enzyme UBC9JBrowse
102at6073Complete271.8125.0XP_074630445.1DNA-directed RNA polymerase II subunit RPB9JBrowse
149at6073Complete474.2216.0XP_074625158.1cytochrome b5 domain-containing protein 1JBrowse
207at6073Duplicated608.1333.0XP_074618279.1fatty acid 2-hydroxylaseJBrowse
207at6073Duplicated568.5325.0XP_074618278.1fatty acid 2-hydroxylaseJBrowse
227at6073Complete688.8313.0XP_074615461.1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete731.9403.0XP_074638029.1zinc finger protein ZIC 4JBrowse
233at6073Complete337.9218.0XP_074627483.1uncharacterized protein LOC116298145JBrowse
302at6073Complete577.0317.0XP_074612967.1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete192.5100.0XP_074630776.1enhancer of rudimentary homologJBrowse
321at6073Complete351.0179.0XP_074628675.1vacuolar protein-sorting-associated protein 25JBrowse
369at6073Duplicated467.3213.0XP_074637738.160S ribosomal protein L10-like proteinJBrowse
369at6073Duplicated467.3213.0XP_074637739.160S ribosomal protein L10-like proteinJBrowse
379at6073Complete513.9273.0XP_074635235.1uridylate-specific endoribonuclease BJBrowse
429at6073Complete332.2168.0XP_074618746.139S ribosomal protein L13, mitochondrialJBrowse
460at6073Complete493.0265.0XP_074630449.1protein STPG4-likeJBrowse
524at6073Complete246.6123.0XP_074620227.1Ubiquitin-like domainJBrowse
533at6073Complete396.9260.0XP_074636250.1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
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