BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Complete672.2367.0FUN_024391-T1testin-likeJBrowse
65at6073Complete472.1232.0FUN_015139-T1MORN repeat-containing protein 3JBrowse
84at6073Complete349.8157.0FUN_038033-T1SUMO-conjugating enzyme UBC9JBrowse
102at6073Complete271.2126.0FUN_031212-T1DNA-directed RNA polymerase II subunit RPB9JBrowse
149at6073Fragmented317.9166.0FUN_025669-T1cytochrome b5 domain-containing protein 1JBrowse
207at6073Complete604.7333.0FUN_034803-T1fatty acid 2-hydroxylaseJBrowse
227at6073Complete688.4313.0FUN_001654-T1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete735.2403.0FUN_033933-T1zinc finger protein ZIC 4JBrowse
233at6073Complete336.1218.0FUN_012142-T1uncharacterized protein LOC116298145JBrowse
302at6073Complete579.6317.0FUN_023421-T1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete192.5100.0FUN_007949-T1enhancer of rudimentary homologJBrowse
321at6073Complete352.9179.0FUN_016338-T1vacuolar protein-sorting-associated protein 25JBrowse
379at6073Fragmented371.0198.0FUN_010728-T1uridylate-specific endoribonuclease BJBrowse
460at6073Complete491.9265.0FUN_030742-T1protein STPG4-likeJBrowse
524at6073Complete246.6123.0FUN_006427-T1Ubiquitin-like domainJBrowse
533at6073Complete397.6260.0FUN_011258-T1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
540at6073Complete746.0339.0FUN_033693-T1WD repeat domain phosphoinositide-interacting protein 3JBrowse
548at6073Duplicated484.1279.0FUN_043278-T1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
548at6073Duplicated443.5258.0FUN_043278-T2ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
598at6073Complete366.4190.0FUN_038403-T1N-alpha-acetyltransferase 60JBrowse
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