BUSCO Gene Details in Cassiopea sp. PORT0000214

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cassiopea sp. PORT0000214Below quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.9% [S: 80.9%, D: 1.1%] F: 7.0%, M: 11.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,624 (81.9%)2,590 (80.9%)34 (1.1%)223 (7.0%)356 (11.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cassiopea sp. PORT0000214: 2,885 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Complete549.6365testin-likeJBrowse
65at6073Complete377.8231MORN repeat-containing protein 3JBrowse
84at6073Complete335.4156SUMO-conjugating enzyme UBC9JBrowse
149at6073Complete441.0214cytochrome b5 domain-containing protein 1JBrowse
207at6073Complete493.4332fatty acid 2-hydroxylaseJBrowse
227at6073Complete635.6312guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete475.5346zinc finger protein ZIC 4JBrowse
302at6073Complete463.5316vesicular integral-membrane protein VIP36-likeJBrowse
321at6073Complete227.8178vacuolar protein-sorting-associated protein 25JBrowse
369at6073Complete447.421260S ribosomal protein L10-like proteinJBrowse
379at6073Complete415.8270uridylate-specific endoribonuclease BJBrowse
429at6073Complete299.216839S ribosomal protein L13, mitochondrialJBrowse
460at6073Complete296.2233protein STPG4-likeJBrowse
524at6073Complete171.9122Ubiquitin-like domainJBrowse
533at6073Complete312.7258somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
540at6073Fragmented546.3270WD repeat domain phosphoinositide-interacting protein 3JBrowse
548at6073Complete358.5252ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
598at6073Complete301.3197N-alpha-acetyltransferase 60JBrowse
614at6073Complete439.9402F-box only protein 42JBrowse
639at6073Complete215.3235uncharacterized protein LOC116305772JBrowse
Go to page: of 145 pages
TOP