BUSCO Gene Details in Cassiopea xamachana

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cassiopea xamachanaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 37.3% [S: 35.2%, D: 2.2%] F: 13.4%, M: 49.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
1,195 (37.3%)1,126 (35.2%)69 (2.2%)428 (13.4%)1,580 (49.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cassiopea xamachana: 1,702 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Duplicated423.1352.0Cxam_g15294.t1testin-like
63at6073Duplicated489.5328.0Cxam_g22501.t1testin-like
65at6073Complete378.0231.0Cxam_g13617.t1MORN repeat-containing protein 3
102at6073Complete243.9122.0Cxam_g11428.t1DNA-directed RNA polymerase II subunit RPB9
149at6073Fragmented295.0148.0Cxam_g21748.t1cytochrome b5 domain-containing protein 1
207at6073Complete496.6333.0Cxam_g26589.t1fatty acid 2-hydroxylase
232at6073Fragmented402.7138.0Cxam_g5227.t1zinc finger protein ZIC 4
302at6073Complete420.8271.0Cxam_g15198.t1vesicular integral-membrane protein VIP36-like
314at6073Fragmented129.769.0Cxam_g28687.t1enhancer of rudimentary homolog
369at6073Fragmented360.4164.0Cxam_g4784.t160S ribosomal protein L10-like protein
460at6073Complete294.1225.0Cxam_g21843.t1protein STPG4-like
524at6073Complete172.0122.0Cxam_g11151.t1Ubiquitin-like domain
533at6073Fragmented343.1106.0Cxam_g21872.t1somatomedin-B and thrombospondin type-1 domain-containing protein
540at6073Complete683.3339.0Cxam_g9136.t1WD repeat domain phosphoinositide-interacting protein 3
548at6073Fragmented268.9181.0Cxam_g15591.t1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-like
614at6073Fragmented238.5172.0Cxam_g18369.t1F-box only protein 42
639at6073Complete232.3236.0Cxam_g24712.t1uncharacterized protein LOC116305772
757at6073Fragmented107.876.0Cxam_g23840.t12-aminoethanethiol dioxygenase-like
765at6073Duplicated240.9293.0Cxam_g12098.t1zinc finger Y-chromosomal 2-like
765at6073Duplicated238.1282.0Cxam_g24753.t1zinc finger Y-chromosomal 2-like
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