BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Lophelia pertusaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 71.4% [S: 70.5%, D: 0.9%] F: 21.6%, M: 7.0%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,286 (71.4%)2,258 (70.5%)28 (0.9%)692 (21.6%)225 (7.0%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Lophelia pertusa: 3,007 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Complete664.6367.0OS493_026616-T1testin-likeJBrowse
65at6073Complete472.6232.0OS493_001119-T1MORN repeat-containing protein 3JBrowse
84at6073Complete352.0157.0OS493_036023-T1SUMO-conjugating enzyme UBC9JBrowse
102at6073Complete275.5125.0OS493_005611-T1DNA-directed RNA polymerase II subunit RPB9JBrowse
149at6073Complete469.4216.0OS493_000599-T1cytochrome b5 domain-containing protein 1JBrowse
207at6073Complete594.0333.0OS493_005034-T1fatty acid 2-hydroxylaseJBrowse
227at6073Complete691.8314.0OS493_017728-T1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete742.7403.0OS493_011115-T1zinc finger protein ZIC 4JBrowse
233at6073Complete293.8215.0OS493_009859-T1uncharacterized protein LOC116298145JBrowse
302at6073Complete585.4317.0OS493_015166-T1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete199.0100.0OS493_020356-T1enhancer of rudimentary homologJBrowse
321at6073Complete232.9177.0OS493_014317-T1vacuolar protein-sorting-associated protein 25JBrowse
379at6073Complete499.5259.0OS493_009163-T1uridylate-specific endoribonuclease BJBrowse
429at6073Complete329.7168.0OS493_004589-T139S ribosomal protein L13, mitochondrialJBrowse
460at6073Complete502.1260.0OS493_012933-T1protein STPG4-likeJBrowse
524at6073Complete240.6122.0OS493_023196-T1Ubiquitin-like domainJBrowse
533at6073Complete395.1260.0OS493_001288-T1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
540at6073Fragmented534.6239.0OS493_018009-T1WD repeat domain phosphoinositide-interacting protein 3JBrowse
548at6073Complete493.9280.0OS493_014839-T1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
598at6073Fragmented311.7169.0OS493_002879-T1N-alpha-acetyltransferase 60JBrowse
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