BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Madracis senariaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 96.9% [S: 69.1%, D: 27.8%] F: 1.8%, M: 1.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,104 (96.9%)2,214 (69.1%)890 (27.8%)56 (1.8%)43 (1.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Madracis senaria: 4,229 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Duplicated669.4367.0ENSVTRP00000039437.1testin-likeJBrowse
63at6073Duplicated668.0366.0ENSVTRP00000039447.1testin-likeJBrowse
65at6073Complete474.0232.0ENSVTRP00000009162.1MORN repeat-containing protein 3JBrowse
84at6073Complete349.0157.0ENSVTRP00000001275.1SUMO-conjugating enzyme UBC9JBrowse
102at6073Complete271.8125.0ENSVTRP00000022032.1DNA-directed RNA polymerase II subunit RPB9JBrowse
149at6073Duplicated477.0216.0ENSVTRP00000031704.1cytochrome b5 domain-containing protein 1JBrowse
149at6073Duplicated476.5216.0ENSVTRP00000031712.1cytochrome b5 domain-containing protein 1JBrowse
207at6073Duplicated594.2333.0ENSVTRP00000001508.1fatty acid 2-hydroxylaseJBrowse
207at6073Duplicated542.6315.0ENSVTRP00000001496.1fatty acid 2-hydroxylaseJBrowse
227at6073Complete686.4313.0ENSVTRP00000019238.1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete737.9401.0ENSVTRP00000005715.1zinc finger protein ZIC 4JBrowse
233at6073Complete308.9214.0ENSVTRP00000029924.1uncharacterized protein LOC116298145JBrowse
302at6073Duplicated582.7317.0ENSVTRP00000017636.1vesicular integral-membrane protein VIP36-likeJBrowse
302at6073Duplicated537.7285.0ENSVTRP00000017622.1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete196.6100.0ENSVTRP00000024854.1enhancer of rudimentary homologJBrowse
321at6073Complete348.7179.0ENSVTRP00000010949.1vacuolar protein-sorting-associated protein 25JBrowse
369at6073Duplicated472.2213.0ENSVTRP00000008730.160S ribosomal protein L10-like proteinJBrowse
369at6073Duplicated471.7212.0ENSVTRP00000008739.160S ribosomal protein L10-like proteinJBrowse
379at6073Duplicated508.5273.0ENSVTRP00000009291.1uridylate-specific endoribonuclease BJBrowse
379at6073Duplicated508.2273.0ENSVTRP00000009279.1uridylate-specific endoribonuclease BJBrowse
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