BUSCO Gene Details in Montipora cactus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Montipora cactusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.1% [S: 70.8%, D: 3.3%] F: 15.7%, M: 10.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,375 (74.1%)2,268 (70.8%)107 (3.3%)504 (15.7%)324 (10.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Montipora cactus: 5,724 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Duplicated662.9367.0BRAKERNUSP00000000807.1testin-likeJBrowse
63at6073Duplicated662.9367.0g4140.t1.1testin-likeJBrowse
63at6073Duplicated567.8362.0BRAKERNUSP00000000789.1testin-likeJBrowse
63at6073Duplicated567.8362.0g4137.t1.1testin-likeJBrowse
65at6073Duplicated474.0232.0BRAKERNUSP00000040146.1MORN repeat-containing protein 3JBrowse
65at6073Duplicated474.0232.0g28718.t1.1MORN repeat-containing protein 3JBrowse
84at6073Duplicated350.0157.0BRAKERNUSP00000004030.1SUMO-conjugating enzyme UBC9JBrowse
84at6073Duplicated350.0157.0g40872.t1.1SUMO-conjugating enzyme UBC9JBrowse
149at6073Duplicated471.0216.0BRAKERNUSP00000002901.1cytochrome b5 domain-containing protein 1JBrowse
149at6073Duplicated471.0216.0g23881.t1.1cytochrome b5 domain-containing protein 1JBrowse
149at6073Duplicated467.8215.0BRAKERNUSP00000002899.1cytochrome b5 domain-containing protein 1JBrowse
149at6073Duplicated467.8215.0g23885.t1.1cytochrome b5 domain-containing protein 1JBrowse
207at6073Duplicated572.2333.0BRAKERNUSP00000026410.1fatty acid 2-hydroxylaseJBrowse
207at6073Duplicated572.2333.0g50541.t1.1fatty acid 2-hydroxylaseJBrowse
227at6073Duplicated683.6313.0BRAKERNUSP00000007555.1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
227at6073Duplicated683.6313.0g8942.t1.1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Duplicated736.3402.0BRAKERNUSP00000002464.1zinc finger protein ZIC 4JBrowse
232at6073Duplicated736.3402.0g26017.t1.1zinc finger protein ZIC 4JBrowse
233at6073Duplicated183.0181.0BRAKERNUSP00000040414.1uncharacterized protein LOC116298145JBrowse
233at6073Duplicated183.0181.0g21684.t1.1uncharacterized protein LOC116298145JBrowse
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