BUSCO Gene Details in Orbicella faveolata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Orbicella faveolataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.6% [S: 72.7%, D: 16.8%] F: 8.5%, M: 1.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,869 (89.6%)2,330 (72.7%)539 (16.8%)273 (8.5%)61 (1.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Orbicella faveolata: 3,961 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Complete1322.7367.0XP_020629849.1testin-likeJBrowse
65at6073Fragmented363.4180.0XP_020621237.1MORN repeat-containing protein 3JBrowse
84at6073Complete346.3157.0XP_020607408.1SUMO-conjugating enzyme UBC9JBrowse
102at6073Complete274.9125.0XP_020605153.1DNA-directed RNA polymerase II subunit RPB9JBrowse
149at6073Complete475.0216.0XP_020608275.1cytochrome b5 domain-containing protein 1JBrowse
207at6073Complete606.9333.0XP_020631306.1fatty acid 2-hydroxylaseJBrowse
227at6073Complete694.4313.0XP_020610757.1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete741.1403.0XP_020603913.1zinc finger protein ZIC 4JBrowse
233at6073Complete327.9218.0XP_020605642.1uncharacterized protein LOC116298145JBrowse
302at6073Complete588.4317.0XP_020627093.1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete198.1100.0XP_020606944.1enhancer of rudimentary homologJBrowse
321at6073Complete357.2179.0XP_020626144.1vacuolar protein-sorting-associated protein 25JBrowse
369at6073Complete474.7214.0XP_020612994.160S ribosomal protein L10-like proteinJBrowse
379at6073Complete522.5274.0XP_020613716.1uridylate-specific endoribonuclease BJBrowse
429at6073Complete332.8168.0XP_020612102.139S ribosomal protein L13, mitochondrialJBrowse
460at6073Complete453.6244.0XP_020624914.1protein STPG4-likeJBrowse
524at6073Complete245.1122.0XP_020604131.1Ubiquitin-like domainJBrowse
533at6073Duplicated405.4260.0XP_020616274.1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
533at6073Duplicated405.4260.0XP_020616275.1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
540at6073Duplicated750.6339.0XP_020609395.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
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