BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Complete612.7339.0pspe_0.1.m1.30002.m1testin-likeJBrowse
65at6073Complete475.8232.0pspe_0.1.m1.28310.m1MORN repeat-containing protein 3JBrowse
84at6073Duplicated350.8157.0pspe_0.1.m1.44343.m1SUMO-conjugating enzyme UBC9JBrowse
84at6073Duplicated350.8157.0pspe_0.1.m1.68486.m1SUMO-conjugating enzyme UBC9JBrowse
102at6073Complete201.8106.0pspe_0.1.m1.33718.m1DNA-directed RNA polymerase II subunit RPB9JBrowse
149at6073Complete474.7216.0pspe_0.1.m1.5263.m1cytochrome b5 domain-containing protein 1JBrowse
207at6073Complete599.0333.0pspe_0.1.m1.30118.m1fatty acid 2-hydroxylaseJBrowse
227at6073Complete656.4313.0pspe_0.1.m1.42524.m1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete729.6403.0pspe_0.1.m1.47445.m1zinc finger protein ZIC 4JBrowse
233at6073Complete312.3216.0pspe_0.1.m1.69365.m1uncharacterized protein LOC116298145JBrowse
302at6073Complete561.7316.0pspe_0.1.m1.24491.m1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete194.899.0pspe_0.1.m1.46243.m1enhancer of rudimentary homologJBrowse
321at6073Fragmented164.080.0pspe_0.1.m1.31453.m1vacuolar protein-sorting-associated protein 25JBrowse
379at6073Complete510.1272.0pspe_0.1.m1.43131.m1uridylate-specific endoribonuclease BJBrowse
429at6073Complete326.0168.0pspe_0.1.m1.46125.m139S ribosomal protein L13, mitochondrialJBrowse
460at6073Complete447.3247.0pspe_0.1.m1.19271.m1protein STPG4-likeJBrowse
524at6073Complete243.6122.0pspe_0.1.m1.68623.m1Ubiquitin-like domainJBrowse
533at6073Complete395.7245.0pspe_0.1.m1.41778.m1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
540at6073Complete748.6339.0pspe_0.1.m1.48552.m1WD repeat domain phosphoinositide-interacting protein 3JBrowse
548at6073Complete404.0249.0pspe_0.1.m1.36683.m1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
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