Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.
Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 98.8% [S: 34.1%, D: 64.7%] F: 0.8%, M: 0.4%
| Complete (C = S + D) | Single-copy (S) | Duplicated (D) | Fragmented (F) | Missing (M) |
|---|---|---|---|---|
| 3,166 (98.8%) | 1,093 (34.1%) | 2,073 (64.7%) | 25 (0.8%) | 12 (0.4%) |
A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.
Merged species code. This row is filed under the code PSINE, which in the source BUSCO run covers 2 species: Paracondylactis sinensis; Platygyra sinensis. The figures above therefore describe them together, not this species alone — which is why the duplicated fraction is inflated and no single species can be called high-quality from it.
| Busco ID | Status | Score | Length | Gene ID | Description | Visualization |
|---|---|---|---|---|---|---|
| 63at6073 | Complete | 640.2 | 367.0 | g14313.t1 | testin-like | JBrowse |
| 65at6073 | Complete | 455.9 | 232.0 | g11127.t1 | MORN repeat-containing protein 3 | JBrowse |
| 84at6073 | Complete | 342.7 | 156.0 | g2548.t1 | SUMO-conjugating enzyme UBC9 | JBrowse |
| 102at6073 | Complete | 263.5 | 123.0 | g12921.t1 | DNA-directed RNA polymerase II subunit RPB9 | JBrowse |
| 149at6073 | Complete | 454.2 | 216.0 | g9058.t1 | cytochrome b5 domain-containing protein 1 | JBrowse |
| 207at6073 | Complete | 587.3 | 333.0 | g9915.t1 | fatty acid 2-hydroxylase | JBrowse |
| 227at6073 | Complete | 685.9 | 314.0 | g7714.t1 | guanine nucleotide-binding protein subunit beta-2-like 1 | JBrowse |
| 232at6073 | Complete | 678.3 | 403.0 | g7291.t1 | zinc finger protein ZIC 4 | JBrowse |
| 233at6073 | Duplicated | 302.3 | 215.0 | g15596.t1 | uncharacterized protein LOC116298145 | JBrowse |
| 233at6073 | Duplicated | 302.3 | 215.0 | g15596.t1.1.67253008 | uncharacterized protein LOC116298145 | JBrowse |
| 302at6073 | Duplicated | 542.2 | 317.0 | g16439.t1 | vesicular integral-membrane protein VIP36-like | JBrowse |
| 302at6073 | Duplicated | 469.0 | 308.0 | g16439.t1.1.67253035 | vesicular integral-membrane protein VIP36-like | JBrowse |
| 314at6073 | Complete | 193.1 | 100.0 | g13059.t1 | enhancer of rudimentary homolog | JBrowse |
| 321at6073 | Complete | 333.4 | 179.0 | g543.t1 | vacuolar protein-sorting-associated protein 25 | JBrowse |
| 379at6073 | Complete | 489.7 | 273.0 | g11495.t1 | uridylate-specific endoribonuclease B | JBrowse |
| 429at6073 | Complete | 326.8 | 168.0 | g6987.t1 | 39S ribosomal protein L13, mitochondrial | JBrowse |
| 460at6073 | Complete | 450.7 | 254.0 | g13140.t1 | protein STPG4-like | JBrowse |
| 524at6073 | Duplicated | 230.3 | 123.0 | g14584.t1 | Ubiquitin-like domain | JBrowse |
| 524at6073 | Duplicated | 204.7 | 107.0 | g14584.t1.1.67252fc3 | Ubiquitin-like domain | JBrowse |
| 533at6073 | Complete | 379.1 | 258.0 | g11553.t1 | somatomedin-B and thrombospondin type-1 domain-containing protein | JBrowse |
