BUSCO Gene Details in Rhopilema esculentum

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Rhopilema esculentumBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 69.8%, D: 19.7%] F: 3.1%, M: 7.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,865 (89.5%)2,234 (69.8%)631 (19.7%)99 (3.1%)239 (7.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Rhopilema esculentum: 4,035 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
63at6073Duplicated547.3364.0XP_065058356.1testin-likeJBrowse
63at6073Duplicated547.4361.0XP_065058357.1testin-likeJBrowse
65at6073Complete378.4229.0XP_065055031.1MORN repeat-containing protein 3JBrowse
84at6073Complete333.8157.0XP_065065752.1SUMO-conjugating enzyme UBC9JBrowse
102at6073Complete243.6123.0XP_065057270.1DNA-directed RNA polymerase II subunit RPB9JBrowse
207at6073Duplicated512.1333.0XP_065064145.1fatty acid 2-hydroxylaseJBrowse
207at6073Duplicated512.1333.0XP_065064146.1fatty acid 2-hydroxylaseJBrowse
227at6073Complete642.5312.0XP_065071861.1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete477.4346.0XP_065070451.1zinc finger protein ZIC 4JBrowse
302at6073Complete467.1316.0XP_065071487.1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete173.7100.0XP_065063527.1enhancer of rudimentary homologJBrowse
321at6073Complete262.2179.0XP_065051836.1vacuolar protein-sorting-associated protein 25JBrowse
369at6073Complete440.6213.0XP_065066448.160S ribosomal protein L10-like proteinJBrowse
379at6073Complete413.2270.0XP_065061961.1uridylate-specific endoribonuclease BJBrowse
429at6073Complete307.2168.0XP_065072312.139S ribosomal protein L13, mitochondrialJBrowse
460at6073Duplicated312.4241.0XP_065062555.1protein STPG4-likeJBrowse
460at6073Duplicated312.4241.0XP_065062563.1protein STPG4-likeJBrowse
524at6073Complete175.9122.0XP_065058506.1Ubiquitin-like domainJBrowse
533at6073Complete307.2259.0XP_065055521.1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
540at6073Complete686.6339.0XP_065066208.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
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