Every cell is one point. Drag to pan, scroll to zoom, shift-drag to select a region; click any group in the legend to isolate it. Use Colour cells by to switch between cell type, cluster, library, quality-control metric and the expression of a single gene.
Click a cell type to isolate it in the atlas above.
| Cell type | Cells | Percent | Markers |
|---|---|---|---|
| Cluster 14 | 1,389 | 14.30% | marker genes |
| Cluster 6 | 1,086 | 11.18% | marker genes |
| Cluster 1 | 815 | 8.39% | marker genes |
| Cluster 8 | 793 | 8.17% | marker genes |
| Cluster 12 | 785 | 8.08% | marker genes |
| Cluster 2 | 721 | 7.42% | marker genes |
| Cluster 16 | 559 | 5.76% | marker genes |
| Cluster 7 | 549 | 5.65% | marker genes |
| Cluster 11 | 542 | 5.58% | marker genes |
| Cluster 4 | 530 | 5.46% | marker genes |
| Cluster 9 | 430 | 4.43% | marker genes |
| Cluster 0 | 376 | 3.87% | marker genes |
| Cluster 3 | 355 | 3.66% | marker genes |
| Cluster 5 | 313 | 3.22% | marker genes |
| Cluster 15 | 238 | 2.45% | marker genes |
| Cluster 10 | 182 | 1.87% | marker genes |
| Cluster 13 | 48 | 0.49% | marker genes |
These are the figures actually applied to the cells shown above, not the values requested in a configuration file. Every dataset is filtered independently; see Single-cell Data for the full table across all datasets.
