Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that evm.TU.Chr11.312 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 20 1 evm.TU.Chr2.405 7.88 14.3 100.0% feature · violin
Cluster 20 2 evm.TU.Chr9.847 11.82 14.3 100.0% feature · violin
Cluster 20 3 evm.TU.Chr6.535 8.37 14.2 100.0% feature · violin
Cluster 20 4 evm.TU.Chr10.546 11.11 14.1 98.6% feature · violin
Cluster 20 5 evm.TU.Chr6.1417 6.69 13.8 98.6% feature · violin
Cluster 20 6 evm.TU.Chr4.1555 11.95 13.7 95.7% feature · violin
Cluster 20 7 evm.TU.Chr4.1556 10.77 13.0 91.3% feature · violin
Cluster 20 8 evm.TU.Chr8.1296 10.50 12.6 88.4% feature · violin
Cluster 20 9 evm.TU.Chr8.815 9.86 10.6 73.9% feature · violin
Cluster 20 10 evm.TU.Chr11.312 4.95 10.1 78.3% feature · violin
Cluster 20 11 evm.TU.Chr12.692 11.75 9.8 68.1% feature · violin
Cluster 20 12 evm.TU.Chr1.917 2.58 9.2 98.6% feature · violin
Cluster 20 13 evm.TU.Chr6.1233 11.12 8.7 60.9% feature · violin
Cluster 20 14 evm.TU.Chr9.1342 3.22 8.5 78.3% feature · violin
Cluster 20 15 evm.TU.Chr10.1252 2.52 7.5 81.2% feature · violin
Cluster 20 16 evm.TU.Chr1.1186 2.68 7.4 87.0% feature · violin
Cluster 20 17 evm.TU.Chr4.1763 1.69 7.3 98.6% feature · violin
Cluster 20 18 evm.TU.Chr12.856 1.68 7.3 92.8% feature · violin
Cluster 20 19 evm.TU.Chr8.515 2.52 7.2 79.7% feature · violin
Cluster 20 20 evm.TU.Chr11.729 4.55 7.2 55.1% feature · violin
Cluster 20 21 evm.TU.Chr13.634 3.03 7.0 66.7% feature · violin
Cluster 20 22 evm.TU.Chr2.491 1.73 6.6 92.8% feature · violin
Cluster 20 23 evm.TU.Chr6.1313 3.50 6.6 56.5% feature · violin
Cluster 20 24 evm.TU.Chr3.510 6.61 6.5 46.4% feature · violin
Cluster 20 25 evm.TU.Chr10.254 1.48 6.5 95.7% feature · violin
Cluster 20 26 evm.TU.Chr6.969 4.46 6.4 49.3% feature · violin
Cluster 20 27 evm.TU.Chr6.1525 2.23 6.3 75.4% feature · violin
Cluster 20 28 evm.TU.Chr1.1125 1.04 6.0 97.1% feature · violin
Cluster 20 29 evm.TU.Chr9.1337 3.71 5.9 49.3% feature · violin
Cluster 20 30 evm.TU.Chr2.352 5.23 5.9 43.5% feature · violin
Cluster 20 31 evm.TU.Chr13.223 4.67 5.8 43.5% feature · violin
Cluster 20 32 evm.TU.Chr6.904 2.37 5.6 60.9% feature · violin
Cluster 20 33 evm.TU.Chr5.698 2.41 5.6 59.4% feature · violin
Cluster 20 34 evm.TU.Chr6.582 1.87 5.5 71.0% feature · violin
Cluster 20 35 evm.TU.Chr8.1169 2.09 4.9 58.0% feature · violin
Cluster 20 36 evm.TU.Chr10.256 1.59 4.8 72.5% feature · violin
Cluster 20 37 evm.TU.Chr4.134 2.27 4.8 52.2% feature · violin
Cluster 20 38 evm.TU.Chr6.485 1.07 4.8 88.4% feature · violin
Cluster 20 39 evm.TU.Chr2.1136 3.67 4.7 37.7% feature · violin
Cluster 20 40 evm.TU.Chr1.911 1.84 4.6 69.6% feature · violin
Cluster 20 41 evm.TU.Chr10.547 1.73 4.6 59.4% feature · violin
Cluster 20 42 evm.TU.Chr7.711 1.45 4.5 89.9% feature · violin
Cluster 20 43 evm.TU.Chr8.518 2.14 4.5 58.0% feature · violin
Cluster 20 44 evm.TU.Chr8.1166 2.54 4.5 43.5% feature · violin
Cluster 20 45 evm.TU.Chr14.843 4.38 4.4 33.3% feature · violin
Cluster 20 46 evm.TU.Chr8.766 2.78 4.4 40.6% feature · violin
Cluster 20 47 evm.TU.Chr10.1357 1.74 4.3 76.8% feature · violin
Cluster 20 48 evm.TU.Chr7.733 1.52 4.3 73.9% feature · violin
Cluster 20 49 evm.TU.Chr3.894 3.75 4.2 33.3% feature · violin
Cluster 20 50 evm.TU.Chr8.1424 1.75 4.2 55.1% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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