Cell Marker

Marker genes are ranked by the Wilcoxon rank-sum test within each cell type, against all other cells. Because an adjusted p-value is minute for almost every gene once a dataset runs to tens of thousands of cells, the table is better filtered on log2 fold change and percent detected. Click any gene to plot its expression; click any cell type to isolate it in the atlas.

This dataset's clusters have not been assigned cell-type names in the source study, so they are listed as cluster N. The number beside each is how many marker genes are recorded for it.

Showing the cell type that evm.TU.Chr12.881 is ranked highest in.

Cell type Rank Gene log2 FC Score % detected Plot
Cluster 12 1 evm.TU.Chr10.1218 10.31 17.1 99.0% feature · violin
Cluster 12 2 evm.TU.Chr6.635 10.33 15.5 90.1% feature · violin
Cluster 12 3 evm.TU.Chr4.138 8.96 14.4 84.2% feature · violin
Cluster 12 4 evm.TU.Chr3.355 7.57 14.3 85.1% feature · violin
Cluster 12 5 evm.TU.Chr10.1850 4.55 12.6 84.2% feature · violin
Cluster 12 6 evm.TU.Chr9.105 10.40 12.6 73.3% feature · violin
Cluster 12 7 evm.TU.Chr6.468 3.83 12.5 89.1% feature · violin
Cluster 12 8 evm.TU.Chr1.1124 2.20 12.4 98.0% feature · violin
Cluster 12 9 evm.TU.Chr10.51 11.35 11.0 63.4% feature · violin
Cluster 12 10 evm.TU.Chr3.1242 9.37 9.9 57.4% feature · violin
Cluster 12 11 evm.TU.Chr4.73 4.36 9.7 64.4% feature · violin
Cluster 12 12 evm.TU.Chr3.279 6.12 9.6 57.4% feature · violin
Cluster 12 13 evm.TU.Chr1.711 8.15 9.5 55.4% feature · violin
Cluster 12 14 evm.TU.Chr6.730 5.56 9.3 56.4% feature · violin
Cluster 12 15 evm.TU.Chr10.986 8.70 9.0 52.5% feature · violin
Cluster 12 16 evm.TU.Chr1.667 8.46 7.5 43.6% feature · violin
Cluster 12 17 evm.TU.Chr6.950 3.63 7.4 51.5% feature · violin
Cluster 12 18 evm.TU.Chr2.813 3.38 6.9 49.5% feature · violin
Cluster 12 19 evm.TU.Chr7.825 8.07 6.4 37.6% feature · violin
Cluster 12 20 evm.TU.Chr8.1184 7.74 6.3 36.6% feature · violin
Cluster 12 21 evm.TU.Chr12.240 2.50 5.9 49.5% feature · violin
Cluster 12 22 evm.TU.Chr8.1430 5.21 5.4 32.7% feature · violin
Cluster 12 23 evm.TU.Chr1.1096 4.80 5.4 32.7% feature · violin
Cluster 12 24 evm.TU.Chr6.186 2.04 5.3 54.5% feature · violin
Cluster 12 25 evm.TU.Chr10.1094 1.83 5.3 63.4% feature · violin
Cluster 12 26 evm.TU.Chr11.1170 1.80 5.3 68.3% feature · violin
Cluster 12 27 evm.TU.Chr6.357 1.66 5.2 90.1% feature · violin
Cluster 12 28 evm.TU.Chr13.717 2.49 5.1 41.6% feature · violin
Cluster 12 29 evm.TU.Chr1.1253 3.93 5.1 32.7% feature · violin
Cluster 12 30 evm.TU.Chr10.1093 2.31 4.9 40.6% feature · violin
Cluster 12 31 evm.TU.Chr11.773 2.10 4.7 42.6% feature · violin
Cluster 12 32 evm.TU.Chr2.173 1.72 4.5 49.5% feature · violin
Cluster 12 33 evm.TU.Chr8.61 2.11 4.4 38.6% feature · violin
Cluster 12 34 evm.TU.Chr14.518 2.55 4.4 34.7% feature · violin
Cluster 12 35 evm.TU.Chr9.1559 1.89 4.4 43.6% feature · violin
Cluster 12 36 evm.TU.Chr12.1026 1.38 4.2 74.3% feature · violin
Cluster 12 37 evm.TU.Chr3.1370 1.73 4.0 42.6% feature · violin
Cluster 12 38 evm.TU.Chr9.1806 1.79 4.0 40.6% feature · violin
Cluster 12 39 evm.TU.Chr10.551 4.00 3.8 23.8% feature · violin
Cluster 12 40 evm.TU.Chr9.1256 3.50 3.6 23.8% feature · violin
Cluster 12 41 evm.TU.Chr7.695 1.11 3.6 67.3% feature · violin
Cluster 12 42 evm.TU.Chr5.88 5.57 3.6 21.8% feature · violin
Cluster 12 43 evm.TU.Chr11.608 1.53 3.6 40.6% feature · violin
Cluster 12 44 evm.TU.Chr10.583 1.56 3.6 38.6% feature · violin
Cluster 12 45 evm.TU.Chr9.302 2.62 3.5 25.7% feature · violin
Cluster 12 46 evm.TU.Chr10.56 1.22 3.5 72.3% feature · violin
Cluster 12 47 evm.TU.Chr3.1392 1.89 3.4 30.7% feature · violin
Cluster 12 48 evm.TU.Chr12.881 8.01 3.4 19.8% feature · violin
Cluster 12 49 evm.TU.Chr3.77 0.93 3.3 94.1% feature · violin
Cluster 12 50 evm.TU.Chr12.882 4.21 3.3 21.8% feature · violin

The accession map for this dataset has not been built, so genes are shown with the identifiers their own data files use.

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